RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 GID8Q9NWU2 228 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 QRICH1Q2TAL8 776 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 A0A1B0GW55 424 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DUX4L2P0CJ85 424 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DUX4L3P0CJ86 424 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DUX4L4P0CJ87 422 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DUX4L5P0CJ88 424 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DUX4L6P0CJ89 424 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DUX4L7P0CJ90 424 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 USP11P51784 963 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 CHI3L2Q15782 390 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 MTERF3Q96E29 417 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 TNIP3Q96KP6 325 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DUX4Q9UBX2 424 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 DTNAQ9Y4J8 743 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 KLK7P49862 253 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 CYLC2Q14093 348 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-205ENST00000609104 ZNF513Q8N8E2 541 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-205ENST00000609104 RNF149Q8NC42 400 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 NFKBIL1Q9UBC1 381 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-205ENST00000609104 CPDO75976 1380 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 RAD51CO43502 376 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 CPA2P48052 419 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 AGBL2Q5U5Z8 902 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 SYNE4Q8N205 404 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 MUC3BQ9H195 1237 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 NSMCE4AQ9NXX6 385 aa13.69□□□□□ -0.22
USP6NL-205ENST00000609104 TMEM120BA0PK00 339 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 SPATA18Q8TC71 538 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 BBS2Q9BXC9 721 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 WEE2P0C1S8 567 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 HS6ST3Q8IZP7 471 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 SLC25A41Q8N5S1 370 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 APPL2Q8NEU8 664 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 MANSC1Q9H8J5 431 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 RBM12Q9NTZ6 932 aaKnown RBP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 TRIP4Q15650 581 aaPredicted RBP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 ZFP42Q96MM3 310 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 SYNDIG1Q9H7V2 258 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 CAAP1Q9H8G2 361 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 TUFT1Q9NNX1 390 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 PTCH1Q13635 1447 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 KCNB1Q14721 858 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 ZIM3Q96PE6 472 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 STMN3Q9NZ72 180 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 IRF1P10914 325 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 LATS2Q9NRM7 1088 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 BAZ2BQ9UIF8 2168 aaKnown RBP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 ECE2O60344 883 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 AP3M2P53677 418 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 EFHBQ8N7U6 833 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 NSL1Q96IY1 281 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 OSBPL10Q9BXB5 764 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 DCP1AQ9NPI6 582 aaPredicted RBP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 SLC16A1P53985 500 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 SPP2Q13103 211 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 AASDHQ4L235 1098 aaPredicted RBP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 FBXO40Q9UH90 709 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 KYAT1Q16773 422 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 PRUNE1Q86TP1 453 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 TMEM2Q9UHN6 1383 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 IGF2BP3O00425 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 SERPINB9P50453 376 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 METTL16Q86W50 562 aaKnown RBP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 SRBD1Q8N5C6 995 aaKnown RBP13.68□□□□□ -0.22
USP6NL-205ENST00000609104 VIPAS39Q9H9C1 493 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
USP6NL-205ENST00000609104 CCT8L1PA6NM43 557 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 POLRMTO00411 1230 aaKnown RBP13.67□□□□□ -0.22
USP6NL-205ENST00000609104 RGS5O15539 181 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 EYA4O95677 639 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 ALBP02768 609 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.221e-8■■■■■ 51.5
USP6NL-205ENST00000609104 PSD3Q9NYI0 1048 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 C6orf203Q9P0P8 240 aaPredicted RBP13.67□□□□□ -0.22
USP6NL-205ENST00000609104 PIN4Q9Y237 131 aaKnown RBP13.67□□□□□ -0.22
USP6NL-205ENST00000609104 PDGFRAP16234 1089 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 WDR72Q3MJ13 1102 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
USP6NL-205ENST00000609104 XPO6Q96QU8 1125 aaKnown RBP13.67□□□□□ -0.22
USP6NL-205ENST00000609104 H7C1W4 665 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 TBC1D19Q8N5T2 526 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 JPH1Q9HDC5 661 aaPredicted RBP13.67□□□□□ -0.22
USP6NL-205ENST00000609104 CD209Q9NNX6 404 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 RHBDL2Q9NX52 303 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 AGAP1Q9UPQ3 857 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 MROH7-TTC4A0A0A0MT08 1334 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 DLGAP3O95886 979 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 NCOA4Q13772 614 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 PTRHD1Q6GMV3 140 aaKnown RBP13.67□□□□□ -0.22
USP6NL-205ENST00000609104 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
USP6NL-205ENST00000609104 TNIP2Q8NFZ5 429 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 ASZ1Q8WWH4 475 aa13.67□□□□□ -0.22
USP6NL-205ENST00000609104 ECSITQ9BQ95 431 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms