RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 FAM196AQ6ZSG2 479 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 H2AFVQ71UI9 128 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 DYMQ7RTS9 669 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 CROCCP3Q8IVE0 287 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 SHKBP1Q8TBC3 707 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 RASGRP4Q8TDF6 673 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 DDX12PQ92771 950 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 MAELQ96JY0 434 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 GPR101Q96P66 508 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 GREM2Q9H772 168 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 PLGRKTQ9HBL7 147 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 RRN3Q9NYV6 651 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 SRP68Q9UHB9 627 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 CCPG1Q9ULG6 757 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 MAD1L1Q9Y6D9 718 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 BRWD3Q6RI45 1802 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 CYP26A1O43174 497 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 DGKIO75912 1065 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 NAT2P11245 290 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 TCF7P36402 384 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 BCAP31P51572 246 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 FOLH1Q04609 750 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ADRM1Q16186 407 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF423Q2M1K9 1284 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 CNNM4Q6P4Q7 775 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 PRELID2Q8N945 189 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ALG3Q92685 438 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ART4Q93070 314 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 PLA2G12BQ9BX93 195 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF652Q9Y2D9 606 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ADGRA3Q8IWK6 1321 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 PHF2O75151 1096 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 GYS1P13807 737 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 RPA3P35244 121 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 ZYXQ15942 572 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 FAM209AQ5JX71 171 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 SNRNP48Q6IEG0 339 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 HIPK4Q8NE63 616 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 GDPD5Q8WTR4 605 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 PRPF18Q99633 342 aaKnown RBP13.26□□□□□ -0.29
CTCFL-218ENST00000608440 NACAP1Q9BZK3 213 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 CARD8Q9Y2G2 431 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 AK5Q9Y6K8 562 aa13.26□□□□□ -0.29
CTCFL-218ENST00000608440 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 TRIM64CA6NLI5 447 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 EYA2O00167 538 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 PODXLO00592 558 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 RARBP10826 455 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 MZF1P28698 734 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 PMLP29590 882 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 HOXD13P35453 343 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 LRP8Q14114 963 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 SLC1A5Q15758 541 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 PPP2R5EQ16537 467 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 PDK4Q16654 411 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 GRAMD1BQ3KR37 738 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF394Q53GI3 561 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 DCAF6Q58WW2 860 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 VASH1Q7L8A9 365 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 ZDHHC14Q8IZN3 488 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 CCDC110Q8TBZ0 833 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 GPATCH1Q9BRR8 931 aaKnown RBP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 FHDC1Q9C0D6 1143 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 ADAMTS6Q9UKP5 1117 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 TTC7AQ9ULT0 858 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 PCDHA3Q9Y5H8 950 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 F8W8V4 182 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 CHRNB2P17787 502 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 CA4P22748 312 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 PHBP35232 272 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 ACADVLP49748 655 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 SEPT6Q14141 434 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 TRIP10Q15642 601 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 ELMSAN1Q6PJG2 1045 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 RNF111Q6ZNA4 994 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 IRF2BP2Q7Z5L9 587 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 DHDDSQ86SQ9 333 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 ZNF410Q86VK4 478 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 C4orf32Q8N8J7 132 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 DDHD1Q8NEL9 900 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 MTBPQ96DY7 904 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 CGREF1Q99674 301 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 SLC7A8Q9UHI5 535 aa13.25□□□□□ -0.29
CTCFL-218ENST00000608440 FBXO9Q9UK97 447 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.25□□□□□ -0.29
CTCFL-218ENST00000608440 GOLGA8TH3BQL2 631 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 K7EPI3 171 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 TRAF5O00463 557 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 RPS6KA4O75676 772 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 TRPA1O75762 1119 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 TTC4O95801 387 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 ENO1P06733 434 aaKnown RBP13.24□□□□□ -0.29
CTCFL-218ENST00000608440 CSF1RP07333 972 aa13.24□□□□□ -0.29
CTCFL-218ENST00000608440 GOLGA8HP0CJ92 632 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms