RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CENPCQ03188 943 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PAK2Q13177 524 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 DSC3Q14574 896 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SYCE1Q8N0S2 351 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SMG8Q8ND04 991 aaKnown RBP13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 WNT8BQ93098 351 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 HPDLQ96IR7 371 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ARID3AQ99856 593 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 IRX2Q9BZI1 471 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 DNAI2Q9GZS0 605 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 AVENQ9NQS1 362 aaPredicted RBP13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CISHQ9NSE2 258 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TRIM10Q9UDY6 481 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 LCMT1Q9UIC8 334 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GTF3C4Q9UKN8 822 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 KIAA1257Q9ULG3 409 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PCDHGC3Q9UN70 934 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PCDHB4Q9Y5E5 795 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MRFAP1Q9Y605 127 aa13.14□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CES2O00748 559 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TLR3O15455 904 aaKnown RBP13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MED7O43513 233 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ABL1P00519 1130 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 KRT19P08727 400 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 UNGP13051 313 aaPredicted RBP13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GNA15P30679 374 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 POLR2BP30876 1174 aaKnown RBP13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GALCP54803 685 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 AMPD2Q01433 879 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 BFSP2Q13515 415 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 STILQ15468 1287 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 WHAMMP3Q1A5X7 153 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CLEC16AQ2KHT3 1053 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 C1orf53Q5VUE5 145 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ACAD10Q6JQN1 1059 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SLC20A1Q8WUM9 679 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PGBD4Q96DM1 585 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 FTHL17Q9BXU8 183 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 UVRAGQ9P2Y5 699 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CDC23Q9UJX2 597 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MICAL3Q7RTP6 2002 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 A0A0U1RQF3 1178 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SMIM28A0A1B0GU29 152 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PIRO00625 290 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RIOK3O14730 519 aaKnown RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CTIFO43310 598 aaKnown RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 URI1O94763 535 aaPredicted RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SLU7O95391 586 aaKnown RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MMEP08473 750 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 COL6A1P12109 1028 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CKBP12277 381 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ITGA4P13612 1032 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TCP1P17987 556 aaKnown RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TNNC1P63316 161 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GPC5P78333 572 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 LPIN1Q14693 890 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PKN2Q16513 984 aaKnown RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 WDR72Q3MJ13 1102 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 DPH6Q7L8W6 267 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SLFN11Q7Z7L1 901 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 UNC93AQ86WB7 457 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PHF13Q86YI8 300 aaPredicted RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SPATA18Q8TC71 538 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PPP1R13LQ8WUF5 828 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ZMAT2Q96NC0 199 aaKnown RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TRMT13Q9NUP7 481 aaKnown RBP13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 GDAP2Q9NXN4 497 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RNF14Q9UBS8 474 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PADI3Q9ULW8 664 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 AGAP1Q9UPQ3 857 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CAPN6Q9Y6Q1 641 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 DUSP10Q9Y6W6 482 aa13.12□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CILPO75339 1184 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 MOCS3O95396 460 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 FTLP02792 175 aaPredicted RBP13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CYP1A2P05177 515 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CTSHP09668 335 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 SV2CQ496J9 727 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 ZNF618Q5T7W0 954 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 C9orf57Q5W0N0 161 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 C11orf63Q6NUN7 778 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 TRAF7Q6Q0C0 670 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 LIMS2Q7Z4I7 341 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 FAM126BQ8IXS8 530 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 CEP112Q8N8E3 955 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 LRRC57Q8N9N7 239 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 FAM84AQ96KN4 292 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PPP1R10Q96QC0 940 aaKnown RBP13.11□□□□□ -0.31
NEDD8-MDP1-203ENST00000604306 PCDHB18PQ96TA0 734 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms