RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 HYOU1Q9Y4L1 999 aa23.81■■□□□ 1.4
PPFIA3-211ENST00000602848 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.81■■□□□ 1.4
PPFIA3-211ENST00000602848 CITO14578 2027 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 GRID2IPA4D2P6 1211 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 GPR182O15218 404 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 KCNE1P15382 129 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 GNA15P30679 374 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 CKAP4Q07065 602 aaKnown RBP23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 MEI1Q5TIA1 1274 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 LHX8Q68G74 356 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 SLC35G2Q8TBE7 412 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 HPDLQ96IR7 371 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 THAP2Q9H0W7 228 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 ACP6Q9NPH0 428 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 AGAP1Q9UPQ3 857 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 PTCH2Q9Y6C5 1203 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 SQORQ9Y6N5 450 aa23.8■■□□□ 1.4
PPFIA3-211ENST00000602848 MTA2O94776 668 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 MYCNP04198 464 aaPredicted RBP23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 CYP1A1P04798 512 aaPredicted RBP23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 MYBL1P10243 752 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 UNGP13051 313 aaPredicted RBP23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 MYO1EQ12965 1108 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 WDR72Q3MJ13 1102 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 FAM26DQ5JW98 314 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 SCARA3Q6AZY7 606 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 HACE1Q8IYU2 909 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 LRRC57Q8N9N7 239 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 RPGRIP1Q96KN7 1286 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 RNF14Q9UBS8 474 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 GTF3C4Q9UKN8 822 aa23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 UBQLN1Q9UMX0 589 aaKnown RBP23.79■■□□□ 1.4
PPFIA3-211ENST00000602848 TADA3O75528 432 aa23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 CD4P01730 458 aa23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 CHRNA1P02708 482 aa23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 ABCB4P21439 1286 aa23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 POLR2BP30876 1174 aaKnown RBP23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 LRRC52Q8N7C0 313 aa23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 VCPIP1Q96JH7 1222 aa23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 TLR10Q9BXR5 811 aa23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 PDCL3Q9H2J4 239 aa23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 NXF3Q9H4D5 531 aaKnown RBP23.78■■□□□ 1.4
PPFIA3-211ENST00000602848 RECQL4O94761 1208 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 PAEPP09466 180 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 CYP3A5P20815 502 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 USP38Q8NB14 1042 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 UVRAGQ9P2Y5 699 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 NXF1Q9UBU9 619 aaKnown RBP23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 ST3GAL5Q9UNP4 418 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 CES2O00748 559 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 LSM8O95777 96 aaKnown RBP23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 CYP1A2P05177 515 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 CENPCQ03188 943 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 COL13A1Q5TAT6 717 aaPredicted RBP23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 TWF2Q6IBS0 349 aaKnown RBP23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 FBXO46Q6PJ61 603 aaPredicted RBP23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 SLC43A3Q8NBI5 491 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 ZNF606Q8WXB4 792 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 UBXN4Q92575 508 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 ZNF518BQ9C0D4 1074 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 NOD1Q9Y239 953 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 IPPQ9Y573 584 aa23.77■■□□□ 1.4
PPFIA3-211ENST00000602848 MYH10P35580 1976 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 CTAGE15A4D2H0 777 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 THAP12O43422 761 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 WEE2P0C1S8 567 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 CTAGE8P0CG41 777 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 ATF7P17544 494 aaPredicted RBP23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 THPOP40225 353 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 PKN2Q16513 984 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 CTAGE6Q86UF2 777 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 CTAGE4Q8IX94 777 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 SMG8Q8ND04 991 aaKnown RBP23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 WNT8BQ93098 351 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 OSBPL9Q96SU4 736 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 TRAIPQ9BWF2 469 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 AVENQ9NQS1 362 aaPredicted RBP23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 PARP2Q9UGN5 583 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 PCDHGC3Q9UN70 934 aa23.76■■□□□ 1.39
PPFIA3-211ENST00000602848 TLR3O15455 904 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 MED7O43513 233 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 CD58P19256 250 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 NSFP46459 744 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 TNNC1P63316 161 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 DNAAF5Q86Y56 855 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 GOLGA1Q92805 767 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 ARHGEF26Q96DR7 871 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 ZMAT2Q96NC0 199 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 MCOLN1Q9GZU1 580 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 ABCB6Q9NP58 842 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 KIAA1257Q9ULG3 409 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 POLIQ9UNA4 740 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 HES2Q9Y543 173 aa23.75■■□□□ 1.39
PPFIA3-211ENST00000602848 SMIM28A0A1B0GU29 152 aa23.74■■□□□ 1.39
PPFIA3-211ENST00000602848 ZSCAN20P17040 1043 aaPredicted RBP23.74■■□□□ 1.39
PPFIA3-211ENST00000602848 PNPLA4P41247 253 aa23.74■■□□□ 1.39
PPFIA3-211ENST00000602848 RPS6KA1Q15418 735 aa23.74■■□□□ 1.39
PPFIA3-211ENST00000602848 TRIM71Q2Q1W2 868 aaKnown RBP23.74■■□□□ 1.39
PPFIA3-211ENST00000602848 RSRC2Q7L4I2 434 aaKnown RBP23.74■■□□□ 1.39
PPFIA3-211ENST00000602848 PHF13Q86YI8 300 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms