RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 IPPQ9Y573 584 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 PCDHB4Q9Y5E5 795 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 PCDHA13Q9Y5I0 950 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 SCN10AQ9Y5Y9 1956 aa13.67□□□□□ -0.22
ZNF548-210ENST00000600442 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.66□□□□□ -0.22
ZNF548-210ENST00000600442 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.66□□□□□ -0.22
ZNF548-210ENST00000600442 RBAK-RBAKDNI3L0D1 243 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 VNN1O95497 513 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 ITGB3P05106 788 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 NFICP08651 508 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 GHRP10912 638 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 CDK7P50613 346 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 MYL6P60660 151 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 FAAP100Q0VG06 881 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 ZNF618Q5T7W0 954 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 TRIM72Q6ZMU5 477 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 LRRC8DQ7L1W4 858 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 EFCAB13Q8IY85 973 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 C17orf53Q8N3J3 647 aaPredicted RBP13.66□□□□□ -0.22
ZNF548-210ENST00000600442 LRRC52Q8N7C0 313 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 APBB2Q92870 758 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 HPDLQ96IR7 371 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 ALS2CR12Q96Q35 445 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 AGPAT1Q99943 283 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 PI4K2AQ9BTU6 479 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 NXF3Q9H4D5 531 aaKnown RBP13.66□□□□□ -0.22
ZNF548-210ENST00000600442 VRTNQ9H8Y1 702 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 LZTFL1Q9NQ48 299 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 ADAMTS1Q9UHI8 967 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 INTUQ9ULD6 942 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 AGAP1Q9UPQ3 857 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 CEP83Q9Y592 693 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 BDP1A6H8Y1 2624 aa13.66□□□□□ -0.22
ZNF548-210ENST00000600442 ATP8B3O60423 1300 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 PTPRJQ12913 1337 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 MED7O43513 233 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 ZNF623O75123 536 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 CD52P31358 61 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 GNG11P61952 73 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 ETF1P62495 437 aaKnown RBP13.65□□□□□ -0.22
ZNF548-210ENST00000600442 LPIN1Q14693 890 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 NAB2Q15742 525 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 TRIM71Q2Q1W2 868 aaKnown RBP13.65□□□□□ -0.22
ZNF548-210ENST00000600442 WDR72Q3MJ13 1102 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 ALKBH5Q6P6C2 394 aaKnown RBP13.65□□□□□ -0.22
ZNF548-210ENST00000600442 ANKRD33Q7Z3H0 272 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 TMEM192Q8IY95 271 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 RNF10Q8N5U6 811 aaKnown RBP13.65□□□□□ -0.22
ZNF548-210ENST00000600442 C1orf127Q8N9H9 656 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 ACRBPQ8NEB7 543 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 SEPT8Q92599 483 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 TATDN2Q93075 761 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 TOX2Q96NM4 488 aa13.65□□□□□ -0.22
ZNF548-210ENST00000600442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.65□□□□□ -0.22
ZNF548-210ENST00000600442 NXF1Q9UBU9 619 aaKnown RBP13.65□□□□□ -0.22
ZNF548-210ENST00000600442 A0A0U1RQF3 1178 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 SMIM28A0A1B0GU29 152 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 ARHGEF37A1IGU5 675 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 CYP26A1O43174 497 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 TACC1O75410 805 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 EOMESO95936 686 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 CST3P01034 146 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 PLEKP08567 350 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 H2AFZP0C0S5 128 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 AKAP5P24588 427 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 DNAJB2P25686 324 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 CASQ1P31415 396 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 NAP1L1P55209 391 aaKnown RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 WNT7BP56706 349 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 CDR2Q01850 454 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 GFPT1Q06210 699 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 TUBB2AQ13885 445 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 ASTE1Q2TB18 679 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 XKR4Q5GH76 650 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 ALKAL1Q6UXT8 129 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 NYAP1Q6ZVC0 841 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 H2AFVQ71UI9 128 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 ZNF571Q7Z3V5 609 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 MRPL10Q7Z7H8 261 aaKnown RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 REXO1L1PQ8IX06 675 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 FAM126BQ8IXS8 530 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 CTNNBL1Q8WYA6 563 aaPredicted RBP13.64□□□□□ -0.23
ZNF548-210ENST00000600442 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 TRIM11Q96F44 468 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 KREMEN1Q96MU8 473 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 ADAM2Q99965 735 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 TUBB2BQ9BVA1 445 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 ZNF576Q9H609 170 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 NAGPAQ9UK23 515 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 KIAA1257Q9ULG3 409 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 EVPLQ92817 2033 aa13.64□□□□□ -0.23
ZNF548-210ENST00000600442 GBF1Q92538 1859 aa13.63□□□□□ -0.23
ZNF548-210ENST00000600442 KIF4AO95239 1232 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms