RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 IL17AQ16552 155 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 TMEM132AQ24JP5 1023 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 CTXN3Q4LDR2 81 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 CYP4A22Q5TCH4 519 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 C1orf186Q6ZWK4 172 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 GAREM2Q75VX8 874 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 PDZD4Q76G19 769 aaPredicted RBP6.69□□□□□ -1.34
VRK3-220ENST00000600259 KCNK18Q7Z418 384 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 IGSF22Q8N9C0 903 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 ZSCAN18Q8TBC5 510 aaPredicted RBP6.69□□□□□ -1.34
VRK3-220ENST00000600259 NETO1Q8TDF5 533 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 IFT74Q96LB3 600 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 ZNF512Q96ME7 567 aaPredicted RBP6.69□□□□□ -1.34
VRK3-220ENST00000600259 ACAP3Q96P50 834 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 MMTAG2Q9BU76 263 aaKnown RBP6.69□□□□□ -1.34
VRK3-220ENST00000600259 CCDC94Q9BW85 323 aaPredicted RBP6.69□□□□□ -1.34
VRK3-220ENST00000600259 GPR88Q9GZN0 384 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 HAPLN2Q9GZV7 340 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 TOPORSQ9NS56 1045 aaPredicted RBP6.69□□□□□ -1.34
VRK3-220ENST00000600259 RBM12Q9NTZ6 932 aaKnown RBP6.69□□□□□ -1.34
VRK3-220ENST00000600259 SLC38A7Q9NVC3 462 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 GMEB2Q9UKD1 530 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 PCDHB8Q9UN66 801 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 KIAA1024Q9UPX6 916 aa6.69□□□□□ -1.34
VRK3-220ENST00000600259 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 TTC26A0AVF1 554 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 CCDC169A6NNP5 214 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 SFI1A8K8P3 1242 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 E9PMD0 336 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 ZNF263O14978 683 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 ADRB2P07550 413 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 OR4Q2P0C623 313 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 MYL4P12829 197 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 WEE1P30291 646 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 CNR2P34972 360 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 CCT6AP40227 531 aaKnown RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 VASPP50552 380 aaPredicted RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 TOB1P50616 345 aaPredicted RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 YARSP54577 528 aaKnown RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 GUCY1B3Q02153 619 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 GPR17Q13304 367 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 CCINQ13939 588 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 ZNF568Q3ZCX4 644 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 SEZ6Q53EL9 994 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 PPM1JQ5JR12 505 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 STXBP5Q5T5C0 1151 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 IQCEQ6IPM2 695 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 CENPPQ6IPU0 288 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 RINT1Q6NUQ1 792 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 MPZL3Q6UWV2 235 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 PRR23CQ6ZRP0 262 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 Q6ZS52 159 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 WDR5BQ86VZ2 330 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 LONP2Q86WA8 852 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 GPIHBP1Q8IV16 184 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 ARID3BQ8IVW6 561 aaPredicted RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 FAM160A2Q8N612 972 aaPredicted RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 LEMD2Q8NC56 503 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 TMEM161BQ8NDZ6 487 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 ERMNQ8TAM6 284 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 KCNN1Q92952 543 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 E2F7Q96AV8 911 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 CHFRQ96EP1 664 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 MSANTD3Q96H12 275 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 RUSC1Q9BVN2 902 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 MRPL4Q9BYD3 311 aaKnown RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 FOXP1Q9H334 677 aaPredicted RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 C8orf33Q9H7E9 229 aaPredicted RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 RXFP3Q9NSD7 469 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 DDX19AQ9NUU7 478 aaKnown RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 TUBGCP4Q9UGJ1 667 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 RBM19Q9Y4C8 960 aaKnown RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 YIPF1Q9Y548 306 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 TIMM13Q9Y5L4 95 aaPredicted RBP6.68□□□□□ -1.34
VRK3-220ENST00000600259 FRYQ5TBA9 3013 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 TRIP11Q15643 1979 aa6.68□□□□□ -1.34
VRK3-220ENST00000600259 ZZEF1O43149 2961 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 A0A1W2PRU2 124 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 SLC38A8A6NNN8 435 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 PP2D1A8MPX8 630 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 SPECC1L-ADORA2AF8WAN1 911 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 PPEF2O14830 753 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 SLC16A4O15374 487 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 EXTL3O43909 919 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 FAM189A1O60320 539 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 HIP1RO75146 1068 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 TOM1L1O75674 476 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 PMLP29590 882 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 CDC25AP30304 524 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 CTHP32929 405 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 RAP1GAPP47736 663 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 LIMK1P53667 647 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 MCL1Q07820 350 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 DUSP4Q13115 394 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 NBR1Q14596 966 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 PPP2R5DQ14738 602 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 ST3GAL2Q16842 350 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 DGKKQ5KSL6 1271 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 TTC38Q5R3I4 469 aa6.67□□□□□ -1.34
VRK3-220ENST00000600259 N4BP2L1Q5TBK1 243 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms