RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 VNN1O95497 513 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 KRT19P08727 400 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 POLR2BP30876 1174 aaKnown RBP13.2□□□□□ -0.3
TGFB1-204ENST00000600196 PIK3CAP42336 1068 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 GATMP50440 423 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 UBXN1Q04323 297 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 PAN2Q504Q3 1202 aaKnown RBP13.2□□□□□ -0.3
TGFB1-204ENST00000600196 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
TGFB1-204ENST00000600196 TAS1R2Q8TE23 839 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 NT5C1BQ96P26 610 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 VPS16Q9H269 839 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 TAB2Q9NYJ8 693 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 LMCD1Q9NZU5 365 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 DNAJB4Q9UDY4 337 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 MAFFQ9ULX9 164 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 IRAK3Q9Y616 596 aa13.2□□□□□ -0.3
TGFB1-204ENST00000600196 ITIH6Q6UXX5 1313 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 CASTOR2A6NHX0 329 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 H3BNC9 293 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 HUS1O60921 280 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 OAZ2O95190 189 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 ODC1P11926 461 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 TRIM21P19474 475 aaKnown RBP13.19□□□□□ -0.3
TGFB1-204ENST00000600196 FGFR3P22607 806 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 PON1P27169 355 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 LHX1P48742 406 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 MYL6P60660 151 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 TAP1Q03518 808 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 TRIM65Q6PJ69 517 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 ANKS3Q6ZW76 656 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 UNC93AQ86WB7 457 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 METTL23Q86XA0 190 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 RNF214Q8ND24 703 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 MRFAP1L1Q96HT8 127 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 NIF3L1Q9GZT8 377 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.19□□□□□ -0.3
TGFB1-204ENST00000600196 CHST7Q9NS84 486 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 MARCH5Q9NX47 278 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 APEX2Q9UBZ4 518 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 MYO6Q9UM54 1294 aa13.19□□□□□ -0.3
TGFB1-204ENST00000600196 TNRC18O15417 2968 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 H7C4K7 107 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 FGF18O76093 207 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 KIF4AO95239 1232 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 SOD2P04179 222 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 CA3P07451 260 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 IBSPP21815 317 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 DNAJB2P25686 324 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 MFAP3P55082 362 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 TNNC1P63316 161 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 NOP14P78316 857 aaKnown RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 TRIM14Q14142 442 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 MRPL58Q14197 206 aaKnown RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 WDR72Q3MJ13 1102 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 FUT10Q6P4F1 479 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 DSTYKQ6XUX3 929 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 RTL10Q7L3V2 364 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 TMCO2Q7Z6W1 182 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 SEMA4DQ92854 862 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 SENP8Q96LD8 212 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 HERC2P3Q9BVR0 1158 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 INTS2Q9H0H0 1204 aaKnown RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 NGRNQ9NPE2 291 aaKnown RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 GCNT4Q9P109 453 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 KIAA1257Q9ULG3 409 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.18□□□□□ -0.3
TGFB1-204ENST00000600196 BACE2Q9Y5Z0 518 aa13.18□□□□□ -0.3
TGFB1-204ENST00000600196 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 GOLGA6L3A6NEY3 463 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 OR6C75A6NL08 312 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 CYB561D2O14569 222 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 GABRDO14764 452 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 B4GALT3O60512 393 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 POU3F3P20264 500 aaPredicted RBP13.17□□□□□ -0.3
TGFB1-204ENST00000600196 WARSP23381 471 aaKnown RBP13.17□□□□□ -0.3
TGFB1-204ENST00000600196 PBX1P40424 430 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 MRE11P49959 708 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 RABGGTBP53611 331 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 DSG1Q02413 1049 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 KCNMA1Q12791 1236 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 TIGD5Q53EQ6 642 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 HSP90AA4PQ58FG1 418 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 KLHDC7AQ5VTJ3 777 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 PPP2R2DQ66LE6 453 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 THEM5Q8N1Q8 247 aa13.17□□□□□ -0.3
TGFB1-204ENST00000600196 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms