RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 CAMK1Q14012 370 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 MIIPQ5JXC2 388 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 C1orf220Q5T0J3 134 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 APTXQ7Z2E3 356 aaKnown RBP23.65■■□□□ 1.38
LTBP4-227ENST00000600026 RNF168Q8IYW5 571 aaPredicted RBP23.65■■□□□ 1.38
LTBP4-227ENST00000600026 ZNF516Q92618 1163 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 HERC2P3Q9BVR0 1158 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 TRIM5Q9C035 493 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 TMEM8AQ9HCN3 771 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 IFNKQ9P0W0 207 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 PUF60Q9UHX1 559 aaKnown RBP23.65■■□□□ 1.38
LTBP4-227ENST00000600026 ITGA11Q9UKX5 1188 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 TSC2P49815 1807 aa23.65■■□□□ 1.38
LTBP4-227ENST00000600026 SF3B1O75533 1304 aaKnown RBP eCLIP23.64■■□□□ 1.382e-6■■■■■ 142.9
LTBP4-227ENST00000600026 A0A1B0GTH6 734 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 LGALS16A8MUM7 142 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 PIRO00625 290 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 POLR2BP30876 1174 aaKnown RBP23.64■■□□□ 1.37
LTBP4-227ENST00000600026 BRCC3P46736 316 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 GCLMP48507 274 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 FMO5P49326 533 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 MXI1P50539 228 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 PPP3CAQ08209 521 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 ADGRE1Q14246 886 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 KRT39Q6A163 491 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 SCARA3Q6AZY7 606 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.64■■□□□ 1.372e-8■■■■■ 30.6
LTBP4-227ENST00000600026 CXorf38Q8TB03 319 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 CDX2Q99626 313 aaPredicted RBP23.64■■□□□ 1.37
LTBP4-227ENST00000600026 GPR62Q9BZJ7 368 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 TLR9Q9NR96 1032 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 SIX4Q9UIU6 781 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 CDH23Q9H251 3354 aa23.64■■□□□ 1.37
LTBP4-227ENST00000600026 P4HA2O15460 535 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 PHACTR2O75167 634 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 SOD2P04179 222 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 MYL7Q01449 175 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 UBXN1Q04323 297 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 BIRC3Q13489 604 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 PTPROQ16827 1216 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 TRAPPC11Q7Z392 1133 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 MYLIPQ8WY64 445 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 NAP1L5Q96NT1 182 aaPredicted RBP23.63■■□□□ 1.37
LTBP4-227ENST00000600026 GAS2L1Q99501 681 aaPredicted RBP23.63■■□□□ 1.37
LTBP4-227ENST00000600026 ZBP1Q9H171 429 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 RTN4Q9NQC3 1192 aaKnown RBP23.63■■□□□ 1.37
LTBP4-227ENST00000600026 AGAP1Q9UPQ3 857 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 NUB1Q9Y5A7 615 aa23.63■■□□□ 1.37
LTBP4-227ENST00000600026 I3L4J1 428 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 PMM2O15305 246 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 KRT19P08727 400 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 IRS1P35568 1242 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 ERVFC1P60507 584 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 TDRD10Q5VZ19 366 aaKnown RBP23.62■■□□□ 1.37
LTBP4-227ENST00000600026 TAS1R1Q7RTX1 841 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 VPS52Q8N1B4 723 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 MRPL38Q96DV4 380 aaKnown RBP23.62■■□□□ 1.37
LTBP4-227ENST00000600026 ZNF560Q96MR9 790 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 XPO4Q9C0E2 1151 aaKnown RBP23.62■■□□□ 1.37
LTBP4-227ENST00000600026 STK39Q9UEW8 545 aa23.62■■□□□ 1.37
LTBP4-227ENST00000600026 R3HCC1Q9Y3T6 440 aaKnown RBP23.62■■□□□ 1.37
LTBP4-227ENST00000600026 FSCN2O14926 492 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 C4BPAP04003 597 aaKnown RBP23.61■■□□□ 1.37
LTBP4-227ENST00000600026 TAF6P49848 677 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 RBP5P82980 135 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 ELAVL2Q12926 359 aaKnown RBP23.61■■□□□ 1.37
LTBP4-227ENST00000600026 NR1I3Q14994 352 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 TIGD5Q53EQ6 642 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 PLPP4Q5VZY2 271 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 GBP6Q6ZN66 633 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 SV2AQ7L0J3 742 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 B3GALT6Q96L58 329 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 TCF25Q9BQ70 676 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 ENTPD7Q9NQZ7 604 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 PCDHGC5Q9Y5F6 944 aa23.61■■□□□ 1.37
LTBP4-227ENST00000600026 GTPBP10A4D1E9 387 aaKnown RBP23.6■■□□□ 1.37
LTBP4-227ENST00000600026 SPTLC1O15269 473 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 TRAPPC3O43617 180 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 CTSAP10619 480 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 IGFBP4P22692 258 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 AARSP49588 968 aaKnown RBP eCLIP23.6■■□□□ 1.37
LTBP4-227ENST00000600026 LILRA4P59901 499 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 TRPC3Q13507 836 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 ZACNQ401N2 412 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 CBWD6Q4V339 395 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 CBWD3Q5JTY5 395 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 CBWD5Q5RIA9 395 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 FAM171A1Q5VUB5 890 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 TMC7Q7Z402 723 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 LRRC52Q8N7C0 313 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 SUSD3Q96L08 255 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 LMCD1Q9NZU5 365 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 MTCH2Q9Y6C9 303 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 VCANP13611 3396 aa23.6■■□□□ 1.37
LTBP4-227ENST00000600026 AP5Z1O43299 807 aa23.59■■□□□ 1.37
LTBP4-227ENST00000600026 POU3F3P20264 500 aaPredicted RBP23.59■■□□□ 1.37
LTBP4-227ENST00000600026 PNPLA4P41247 253 aa23.59■■□□□ 1.37
LTBP4-227ENST00000600026 GLUD2P49448 558 aa23.59■■□□□ 1.37
LTBP4-227ENST00000600026 USP41Q3LFD5 358 aa23.59■■□□□ 1.37
LTBP4-227ENST00000600026 SV2CQ496J9 727 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms