RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 RAB30Q15771 203 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.7□□□□□ -1.5
PAF1-208ENST00000598594 MBNL2Q5VZF2 373 aaKnown RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 TIGD7Q6NT04 549 aaPredicted RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 CYP4F22Q6NT55 531 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 ANGPTL8Q6UXH0 198 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 BBS12Q6ZW61 710 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 C16orf59Q7L2K0 433 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 TRIM46Q7Z4K8 759 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 GPR149Q86SP6 731 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 MCATQ8IVS2 390 aaKnown RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 CCDC117Q8IWD4 279 aaPredicted RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 DIS3L2Q8IYB7 885 aaKnown RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 ADGRG2Q8IZP9 1017 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 USHBP1Q8N6Y0 703 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 DDX54Q8TDD1 881 aaKnown RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 DEPDC1BQ8WUY9 529 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 THAP4Q8WY91 577 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 FBXW5Q969U6 566 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 VPS33AQ96AX1 596 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 RGMAQ96B86 450 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 ZNF653Q96CK0 615 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 FAM81BQ96LP2 452 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 GBP5Q96PP8 586 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 PTPN18Q99952 460 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 CITED2Q99967 270 aaPredicted RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 THUMPD3Q9BV44 507 aaKnown RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 ANO3Q9BYT9 981 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.7□□□□□ -1.5
PAF1-208ENST00000598594 PCIF1Q9H4Z3 704 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 MROH8Q9H579 483 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 MKNK2Q9HBH9 465 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 SNTG1Q9NSN8 517 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 ACTR3BQ9P1U1 418 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 CALCOCO1Q9P1Z2 691 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 C5AR2Q9P296 337 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 EXTL2Q9UBQ6 330 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 SMG5Q9UPR3 1016 aaKnown RBP5.7□□□□□ -1.5
PAF1-208ENST00000598594 EXOC7Q9UPT5 735 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 JRKLQ9Y4A0 524 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 WASF2Q9Y6W5 498 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 FAM169AQ9Y6X4 670 aa5.7□□□□□ -1.5
PAF1-208ENST00000598594 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 CLRN2A0PK11 232 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 CCDC78A2IDD5 438 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 IKBKBO14920 756 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 CTAGE5O15320 804 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 DDHD2O94830 711 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 BMP1P13497 986 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 MTHFD2P13995 350 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 NFKB1P19838 968 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 CD40P25942 277 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 SKIV2L2P42285 1042 aaKnown RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 KCNC1P48547 511 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 AARSP49588 968 aaKnown RBP eCLIP5.69□□□□□ -1.5
PAF1-208ENST00000598594 ZNF445P59923 1031 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 ACTR2P61160 394 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 ETF1P62495 437 aaKnown RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 CCNA1P78396 465 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 HTRA4P83105 476 aaPredicted RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 YWHAHQ04917 246 aaPredicted RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 GALNT2Q10471 571 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 SCRN1Q12765 414 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 DUSP4Q13115 394 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 SUZ12Q15022 739 aaKnown RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 NOL9Q5SY16 702 aaKnown RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 FDX2Q6P4F2 183 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 SLC30A9Q6PML9 568 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 GBP6Q6ZN66 633 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 VN1R5Q7Z5H4 357 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 GLRX5Q86SX6 157 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 C12orf40Q86WS4 652 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 ZFPM1Q8IX07 1006 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 ADSSL1Q8N142 457 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 LRRC43Q8N309 656 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 CCDC148Q8NFR7 591 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 LINS1Q8NG48 757 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 CEP76Q8TAP6 659 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 EID2BQ96D98 161 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 IQCDQ96DY2 449 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 MSLNLQ96KJ4 702 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 LZTS2Q9BRK4 669 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 FUT8Q9BYC5 575 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 KRT23Q9C075 422 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 FTOQ9C0B1 505 aaKnown RBP eCLIP5.69□□□□□ -1.5
PAF1-208ENST00000598594 SLC7A5P2Q9GIP4 190 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 RNPEPQ9H4A4 650 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 TAF1DQ9H5J8 278 aaPredicted RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 IPPKQ9H8X2 491 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 ZNF304Q9HCX3 659 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 MID1IP1Q9NPA3 183 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 INCENPQ9NQS7 918 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 GPR27Q9NS67 375 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 CATSPERZQ9NTU4 200 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 DDX18Q9NVP1 670 aaKnown RBP5.69□□□□□ -1.5
PAF1-208ENST00000598594 TAS2R3Q9NYW6 316 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 TJP2Q9UDY2 1190 aa5.69□□□□□ -1.5
PAF1-208ENST00000598594 MSRAQ9UJ68 235 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms