RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 CHURC1-FNTBB4DL54 471 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 ZNF263O14978 683 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 RETP07949 1114 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 ADRB1P08588 477 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 CXCL12P48061 93 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 FNTBP49356 437 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 CCR3P51677 355 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 SLC10A6Q3KNW5 377 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 IQCEQ6IPM2 695 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 PRR23BQ6ZRT6 265 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 APBB1IPQ7Z5R6 666 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 DDX12PQ92771 950 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 C8orf76Q96K31 380 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 ACAP3Q96P50 834 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 LRRC3BQ96PB8 259 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 IER2Q9BTL4 223 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 DDX19AQ9NUU7 478 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 ARHGAP28Q9P2N2 729 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 RAB23Q9ULC3 237 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 NUB1Q9Y5A7 615 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 CACNA1GO43497 2377 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 LAMA1P25391 3075 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 FRYQ5TBA9 3013 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 K7ESF4 209 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 SLC30A4O14863 429 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 GDF9O60383 454 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 MCF2P10911 925 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 SOX9P48436 509 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 FXR2P51116 673 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 MAPK7Q13164 816 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 NBR1Q14596 966 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 SEZ6Q53EL9 994 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 SPRYD3Q8NCJ5 442 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 BEST2Q8NFU1 509 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 DEPDC1BQ8WUY9 529 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 MRPL4Q9BYD3 311 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 CRISPLD1Q9H336 500 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 ASAH2Q9NR71 780 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 SEMA4GQ9NTN9 838 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 PHLPP2Q6ZVD8 1323 aa17.97■□□□□ 0.47
SHKBP1-215ENST00000597649 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 E9PMD0 336 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 HIP1RO75146 1068 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 PTGDRQ13258 359 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 SIM2Q14190 667 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 PPP2R5DQ14738 602 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 TTC38Q5R3I4 469 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 HAUS3Q68CZ6 603 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 ZNF280DQ6N043 979 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 TXNDC11Q6PKC3 985 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 TMC8Q8IU68 726 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 ELMOD1Q8N336 334 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 SPEM1Q8N4L4 309 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 TCHPQ9BT92 498 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 RUSC1Q9BVN2 902 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 DNAJC25Q9H1X3 360 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 TUBGCP4Q9UGJ1 667 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 MAFFQ9ULX9 164 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 PCDHB8Q9UN66 801 aa17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 TIMM13Q9Y5L4 95 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-215ENST00000597649 SFI1A8K8P3 1242 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 H3BQV1 296 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 LRP3O75074 770 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 OR4Q2P0C623 313 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 HARSP12081 509 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 MCM4P33991 863 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 MLLT6P55198 1093 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 ORC2Q13416 577 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 PPM1JQ5JR12 505 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 STXBP5Q5T5C0 1151 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 LARP1BQ659C4 914 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 MPZL3Q6UWV2 235 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 Q6ZS52 159 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 APPL2Q8NEU8 664 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 NETO1Q8TDF5 533 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 KMT5AQ9NQR1 393 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 YIPF1Q9Y548 306 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 TICRRQ7Z2Z1 1910 aa17.95■□□□□ 0.46
SHKBP1-215ENST00000597649 A0A1W2PRU2 124 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 SLC38A8A6NNN8 435 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 PP2D1A8MPX8 630 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 CHADO15335 359 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 SLC16A4O15374 487 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 OAZ2O95190 189 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 PDCP20941 246 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 SPAG1Q07617 926 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 FCHO2Q0JRZ9 810 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 DUSP4Q13115 394 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 PDIA5Q14554 519 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 CSRP2Q16527 193 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 RINT1Q6NUQ1 792 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 PRR23CQ6ZRP0 262 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 C1orf186Q6ZWK4 172 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 KCNK18Q7Z418 384 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 LEMD2Q8NC56 503 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 TTC8Q8TAM2 541 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 PGLYRP2Q96PD5 576 aa17.94■□□□□ 0.46
SHKBP1-215ENST00000597649 MKNK1Q9BUB5 465 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms