RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 M0QZQ0 153 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 SYN3O14994 580 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 POU3F3P20264 500 aaPredicted RBP15.46■□□□□ 0.07
VRK3-213ENST00000597215 FGFR3P22607 806 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 PIK3CAP42336 1068 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 MXI1P50539 228 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 ERVFC1P60507 584 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 NCOA4Q13772 614 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 CAMK1Q14012 370 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 ADGRE1Q14246 886 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 KRT39Q6A163 491 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 C15orf39Q6ZRI6 1047 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 TAS1R1Q7RTX1 841 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 CEP57Q86XR8 500 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 IRF2BP1Q8IU81 584 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 CREBRFQ8IUR6 639 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 GPR65Q8IYL9 337 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 APPL2Q8NEU8 664 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 SLC35C1Q96A29 364 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 HPDLQ96IR7 371 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 SENP8Q96LD8 212 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 MRPL17Q9NRX2 175 aaKnown RBP15.46■□□□□ 0.07
VRK3-213ENST00000597215 CHST7Q9NS84 486 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 PCDHB8Q9UN66 801 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.46■□□□□ 0.07
VRK3-213ENST00000597215 VWA8A3KMH1 1905 aa15.46■□□□□ 0.07
VRK3-213ENST00000597215 KPNA7A9QM74 516 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 SPTLC1O15269 473 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 N4BP1O75113 896 aaKnown RBP15.45■□□□□ 0.06
VRK3-213ENST00000597215 VNN1O95497 513 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 CXCL14O95715 111 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 STAU1O95793 577 aaKnown RBP15.45■□□□□ 0.06
VRK3-213ENST00000597215 CAVIN2O95810 425 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 CST3P01034 146 aaPredicted RBP15.45■□□□□ 0.06
VRK3-213ENST00000597215 HLA-DRAP01903 254 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 ODC1P11926 461 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 FOSL2P15408 326 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 TKTP29401 623 aaKnown RBP15.45■□□□□ 0.06
VRK3-213ENST00000597215 ATICP31939 592 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 CA8P35219 290 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 IRS1P35568 1242 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 MTIF2P46199 727 aaKnown RBP15.45■□□□□ 0.06
VRK3-213ENST00000597215 ZNF165P49910 485 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 DSG1Q02413 1049 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 PTPN14Q15678 1187 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 PDXDC1Q6P996 788 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 AOPEPQ8N6M6 819 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 RIN2Q8WYP3 895 aaPredicted RBP15.45■□□□□ 0.06
VRK3-213ENST00000597215 PPP2R3CQ969Q6 453 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 NSUN3Q9H649 340 aaKnown RBP15.45■□□□□ 0.06
VRK3-213ENST00000597215 SAMSN1Q9NSI8 373 aaKnown RBP15.45■□□□□ 0.06
VRK3-213ENST00000597215 IRAK3Q9Y616 596 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 MTCH2Q9Y6C9 303 aa15.45■□□□□ 0.06
VRK3-213ENST00000597215 MYO7AQ13402 2215 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.44■□□□□ 0.06
VRK3-213ENST00000597215 SMTNL1A8MU46 457 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 KCNJ18B7U540 433 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 C2CD2LO14523 706 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 CLSTN1O94985 981 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 AFPP02771 609 aaKnown RBP15.44■□□□□ 0.06
VRK3-213ENST00000597215 TYMPP19971 482 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 MYL6P60660 151 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 MYL7Q01449 175 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 CREMQ03060 361 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 KCNJ12Q14500 433 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 ZNF699Q32M78 642 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 RTP2Q5QGT7 225 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 KIAA0319Q5VV43 1072 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 SCARA3Q6AZY7 606 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 ANKS3Q6ZW76 656 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 MRPL43Q8N983 215 aaKnown RBP15.44■□□□□ 0.06
VRK3-213ENST00000597215 AUTS2Q8WXX7 1259 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 PIK3R5Q8WYR1 880 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 TAF4BQ92750 862 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 B3GALT6Q96L58 329 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 EMILIN2Q9BXX0 1053 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 IMPG2Q9BZV3 1241 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 VRTNQ9H8Y1 702 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.44■□□□□ 0.06
VRK3-213ENST00000597215 GDAP2Q9NXN4 497 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 DSEQ9UL01 958 aa15.44■□□□□ 0.06
VRK3-213ENST00000597215 PRRC2BQ5JSZ5 2229 aaKnown RBP15.44■□□□□ 0.06
VRK3-213ENST00000597215 TSC2P49815 1807 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 C2orf71A6NGG8 1288 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 CYB561D2O14569 222 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 PMM2O15305 246 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 P4HA2O15460 535 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 HUS1O60921 280 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 CYP11A1P05108 521 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 EEF1GP26641 437 aaKnown RBP15.43■□□□□ 0.06
VRK3-213ENST00000597215 FMO5P49326 533 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 CETN1Q12798 172 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 KCNH2Q12809 1159 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 PSMD5Q16401 504 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 MAN2A1Q16706 1144 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 SGSM1Q2NKQ1 1148 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 CBWD6Q4V339 395 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 HSP90AA4PQ58FG1 418 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 TCP11X2Q5H9J9 407 aa15.43■□□□□ 0.06
VRK3-213ENST00000597215 CBWD3Q5JTY5 395 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms