RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 PLCB3Q01970 1234 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 FAM171A1Q5VUB5 890 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 C15orf39Q6ZRI6 1047 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 DDX53Q86TM3 631 aaKnown RBP16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 METTL23Q86XA0 190 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 VPS52Q8N1B4 723 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 MICAL1Q8TDZ2 1067 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 GDPD5Q8WTR4 605 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 TAF4BQ92750 862 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 PCMTD1Q96MG8 357 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 MMS19Q96T76 1030 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 PI4K2AQ9BTU6 479 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 ENTPD7Q9NQZ7 604 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 GCNT4Q9P109 453 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 SNX9Q9Y5X1 595 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 H3BNC9 293 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 CYB561D2O14569 222 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 SPTLC1O15269 473 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 HUS1O60921 280 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 URODP06132 367 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 IGFBP6P24592 240 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 MCCD1P59942 119 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 UBE3AQ05086 875 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 LRMPQ12912 555 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 USP41Q3LFD5 358 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 WDR72Q3MJ13 1102 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 TIGD5Q53EQ6 642 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 ZNF667Q5HYK9 610 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 SCARA3Q6AZY7 606 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 SCARA5Q6ZMJ2 495 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 GBP6Q6ZN66 633 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 TMC7Q7Z402 723 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 APPL2Q8NEU8 664 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 POF1BQ8WVV4 589 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 SENP8Q96LD8 212 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 GPR62Q9BZJ7 368 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 INTS2Q9H0H0 1204 aaKnown RBP16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 HSD3B7Q9H2F3 369 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 RALGAPA2Q2PPJ7 1873 aa16.07■□□□□ 0.16
ARHGEF1-214ENST00000596957 RANBP2P49792 3224 aaKnown RBP16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 FNDC1Q4ZHG4 1894 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 C2CD2LO14523 706 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 GRM6O15303 877 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 SOD2P04179 222 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 GLUD2P49448 558 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 NOP14P78316 857 aaKnown RBP16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 UBXN1Q04323 297 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 PTPROQ16827 1216 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 EXOC3L4Q17RC7 722 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 MIIPQ5JXC2 388 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 CXorf38Q8TB03 319 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 SEMA4DQ92854 862 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 ELMO3Q96BJ8 720 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 SUSD3Q96L08 255 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 B3GALT6Q96L58 329 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 FAM161BQ96MY7 647 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 TCF25Q9BQ70 676 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 TTPALQ9BTX7 342 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 HERC2P3Q9BVR0 1158 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 TLR9Q9NR96 1032 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 DSEQ9UL01 958 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 LZTS1Q9Y250 596 aa16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 TIMM13Q9Y5L4 95 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF1-214ENST00000596957 LGALS16A8MUM7 142 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 RFXAPO00287 272 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 STAU1O95793 577 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 ASS1P00966 412 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 TPM3P06753 285 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 FANCCQ00597 558 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 SPOPLQ6IQ16 392 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 CD300LGQ6UXG3 332 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 TAS1R1Q7RTX1 841 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 SPPL3Q8TCT6 385 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 RIN2Q8WYP3 895 aaPredicted RBP16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 NT5C1BQ96P26 610 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 XYLT2Q9H1B5 865 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 RBSNQ9H1K0 784 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 PRDM12Q9H4Q4 367 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 COQ4Q9Y3A0 265 aa16.05■□□□□ 0.16
ARHGEF1-214ENST00000596957 CITO14578 2027 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 EPOPA6NHQ4 379 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 M0QZQ0 153 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 SYN3O14994 580 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 PMM2O15305 246 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 AARSP49588 968 aaKnown RBP eCLIP16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 UBASH3AP57075 661 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 YWHAHQ04917 246 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 SMC1AQ14683 1233 aaKnown RBP16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 PLPP4Q5VZY2 271 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 PDXDC1Q6P996 788 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 GAS2L3Q86XJ1 694 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 THEM5Q8N1Q8 247 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 TOP6BLQ8N6T0 577 aa16.04■□□□□ 0.16
ARHGEF1-214ENST00000596957 VN1R3Q9BXE9 311 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms