RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 ECI2O75521 394 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 B3GAT3O94766 335 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 IDEP14735 1019 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 MAGEA9P43362 315 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 CLCNKBP51801 687 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 STRN3Q13033 797 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 ZNF568Q3ZCX4 644 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 ZC2HC1CQ53FD0 456 aaPredicted RBP17.36■□□□□ 0.37
USHBP1-205ENST00000595993 SLC8B1Q6J4K2 584 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 ALKAL1Q6UXT8 129 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 ANKS3Q6ZW76 656 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 CEP120Q8N960 986 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 FSIP1Q8NA03 581 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 CLDN23Q96B33 292 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 ZBTB45Q96K62 511 aaPredicted RBP17.36■□□□□ 0.37
USHBP1-205ENST00000595993 BCO2Q9BYV7 579 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 IKZF4Q9H2S9 585 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 MAGEF1Q9HAY2 307 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 LTB4R2Q9NPC1 389 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 PANK4Q9NVE7 773 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 DLL3Q9NYJ7 618 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 GDE1Q9NZC3 331 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 CHMP5Q9NZZ3 219 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 TBC1D7Q9P0N9 293 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 TBX20Q9UMR3 447 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 GDAQ9Y2T3 454 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 H0YCG3 227 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 TBC1D4O60343 1298 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 PPP1R37O75864 691 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 ABLIM3O94929 683 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 GAP43P17677 238 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 TKTP29401 623 aaKnown RBP17.35■□□□□ 0.37
USHBP1-205ENST00000595993 CASP5P51878 434 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 GTF2BQ00403 316 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 SLC5A9Q2M3M2 681 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 GLRA4Q5JXX5 417 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 CNNM4Q6P4Q7 775 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 KIAA2013Q8IYS2 634 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 HPS3Q969F9 1004 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 C7orf25Q9BPX7 421 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 KXD1Q9BQD3 176 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 STRA6Q9BX79 667 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 HAPLN2Q9GZV7 340 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 BLZF1Q9H2G9 400 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 ST6GALNAC4Q9H4F1 302 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 SEL1LQ9UBV2 794 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 POLIQ9UNA4 740 aa17.35■□□□□ 0.37
USHBP1-205ENST00000595993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.34■□□□□ 0.37
USHBP1-205ENST00000595993 SMIM28A0A1B0GU29 152 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 CITO14578 2027 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 SPTLC1O15269 473 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 TRAPPC3O43617 180 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 PIGRP01833 764 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 GRM5P41594 1212 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 AFMP43652 599 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 ASIC1P78348 528 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 SOX4Q06945 474 aaPredicted RBP17.34■□□□□ 0.37
USHBP1-205ENST00000595993 FZD5Q13467 585 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 CUL4BQ13620 913 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 PDCD11Q14690 1871 aaKnown RBP17.34■□□□□ 0.37
USHBP1-205ENST00000595993 SLC39A4Q6P5W5 647 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 MPZL3Q6UWV2 235 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 ZPBP2Q6X784 338 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 ZNF720Q7Z2F6 126 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 MAP4K3Q8IVH8 894 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 ZBTB44Q8NCP5 570 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 GLIS3Q8NEA6 775 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 ZNF461Q8TAF7 563 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 PYM1Q9BRP8 204 aaKnown RBP17.34■□□□□ 0.37
USHBP1-205ENST00000595993 LRRC27Q9C0I9 530 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 GOLGA2P5Q9HBQ8 144 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 OLFML3Q9NRN5 406 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 ANKFY1Q9P2R3 1169 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 PCDHGA2Q9Y5H1 932 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 NCOR2Q9Y618 2525 aa17.34■□□□□ 0.37
USHBP1-205ENST00000595993 FAM170BA6NMN3 283 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 TISP43B9A030 160 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 MEFVO15553 781 aaPredicted RBP17.33■□□□□ 0.36
USHBP1-205ENST00000595993 KINO60870 393 aaKnown RBP17.33■□□□□ 0.36
USHBP1-205ENST00000595993 TOM1L1O75674 476 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 MICAL2O94851 1124 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 RHOP08100 348 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 MCF2P10911 925 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 HARSP12081 509 aaKnown RBP17.33■□□□□ 0.36
USHBP1-205ENST00000595993 FCARP24071 287 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 SYKP43405 635 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 RPS9P46781 194 aaKnown RBP17.33■□□□□ 0.36
USHBP1-205ENST00000595993 AMPD3Q01432 767 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 ROR1Q01973 937 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 KCNA1Q09470 495 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 MRPL58Q14197 206 aaKnown RBP17.33■□□□□ 0.36
USHBP1-205ENST00000595993 PUM1Q14671 1186 aaKnown RBP eCLIP17.33■□□□□ 0.36
USHBP1-205ENST00000595993 PRSS36Q5K4E3 855 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 CCDC65Q8IXS2 484 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 CEP57L1Q8IYX8 460 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 ZNF687Q8N1G0 1237 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 DCLK2Q8N568 766 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 ELSPBP1Q96BH3 223 aa17.33■□□□□ 0.36
USHBP1-205ENST00000595993 BICD1Q96G01 975 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms