RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ENPEPQ07075 957 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 PSMD5Q16401 504 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 SV2CQ496J9 727 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 SCARA3Q6AZY7 606 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 EP400NLQ6ZTU2 488 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 LRRC52Q8N7C0 313 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 SENP8Q96LD8 212 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 CEP63Q96MT8 703 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 FNIP2Q9P278 1114 aa15.48■□□□□ 0.07
LIG1-208ENST00000595758 ATG2AQ2TAZ0 1938 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 ARHGEF37A1IGU5 675 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 KPNA7A9QM74 516 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 H7C4K7 107 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 TEX28O15482 410 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 ADH1AP07327 375 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 BFSP1Q12934 665 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 MYO1EQ12965 1108 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 ADAM15Q13444 863 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 BIRC3Q13489 604 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 TRPC3Q13507 836 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 COL19A1Q14993 1142 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 CTC1Q2NKJ3 1217 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 DPCR1Q3MIW9 517 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 VARS2Q5ST30 1063 aaKnown RBP15.47■□□□□ 0.07
LIG1-208ENST00000595758 SASS6Q6UVJ0 657 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 ANKS3Q6ZW76 656 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 FILIP1Q7Z7B0 1213 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 PPFIBP1Q86W92 1011 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 HLA-CQ95604 372 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 SYAP1Q96A49 352 aaPredicted RBP15.47■□□□□ 0.07
LIG1-208ENST00000595758 PABPC5Q96DU9 382 aaKnown RBP15.47■□□□□ 0.07
LIG1-208ENST00000595758 BORCS6Q96GS4 357 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 HPDLQ96IR7 371 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 CLDND1Q9NY35 253 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 TMEM63CQ9P1W3 806 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 DACH1Q9UI36 760 aa15.47■□□□□ 0.07
LIG1-208ENST00000595758 CYB561D2O14569 222 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 LINC01565O15544 149 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 FGFR1OPO95684 399 aaKnown RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 CST3P01034 146 aaPredicted RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 C4BPAP04003 597 aaKnown RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 TRIM49P0CI25 452 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 TRIM49CP0CI26 452 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 ODC1P11926 461 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 TYMPP19971 482 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 NDUFV1P49821 464 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 MCCD1P59942 119 aaPredicted RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 C1orf220Q5T0J3 134 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 CAVIN1Q6NZI2 390 aaKnown RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 LLGL2Q6P1M3 1020 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 CLSTN3Q9BQT9 956 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 UBE2ZQ9H832 354 aaPredicted RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 PRDM6Q9NQX0 595 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 MTRRQ9UBK8 725 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 ARMCX3Q9UH62 379 aaPredicted RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 COG5Q9UP83 839 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 TIMM13Q9Y5L4 95 aaPredicted RBP15.46■□□□□ 0.07
LIG1-208ENST00000595758 BACE2Q9Y5Z0 518 aa15.46■□□□□ 0.07
LIG1-208ENST00000595758 BRWD1Q9NSI6 2320 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 SCN1AP35498 2009 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.45■□□□□ 0.06
LIG1-208ENST00000595758 STX10O60499 249 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 OAZ2O95190 189 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 SRGAP2BP0DMP2 458 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 ERCC5P28715 1186 aaPredicted RBP15.45■□□□□ 0.06
LIG1-208ENST00000595758 GCLMP48507 274 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 RBM10P98175 930 aaKnown RBP15.45■□□□□ 0.06
LIG1-208ENST00000595758 MRPL58Q14197 206 aaKnown RBP15.45■□□□□ 0.06
LIG1-208ENST00000595758 KLHL40Q2TBA0 621 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 ZACNQ401N2 412 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 CCDC40Q4G0X9 1142 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 CTXN3Q4LDR2 81 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 CT47A1Q5JQC4 288 aaPredicted RBP15.45■□□□□ 0.06
LIG1-208ENST00000595758 SV2AQ7L0J3 742 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 FRMD5Q7Z6J6 570 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 PALB2Q86YC2 1186 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 GLYCTKQ8IVS8 523 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 VN1R2Q8NFZ6 395 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 SLC22A17Q8WUG5 538 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 MED15Q96RN5 788 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 SRRTQ9BXP5 876 aaKnown RBP15.45■□□□□ 0.06
LIG1-208ENST00000595758 METTL14Q9HCE5 456 aaKnown RBP15.45■□□□□ 0.06
LIG1-208ENST00000595758 GDAP2Q9NXN4 497 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 DSEQ9UL01 958 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 HCFC2Q9Y5Z7 792 aa15.45■□□□□ 0.06
LIG1-208ENST00000595758 ADAM12O43184 909 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 HUS1O60921 280 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 SLC34A2O95436 690 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 GNA14O95837 355 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 GLP2RO95838 553 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 KCNA5P22460 613 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 GTF2H1P32780 548 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 OR1D2P34982 312 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 LTBRP36941 435 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 CLCN4P51793 760 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 MYL6P60660 151 aa15.44■□□□□ 0.06
LIG1-208ENST00000595758 YWHAHQ04917 246 aaPredicted RBP15.44■□□□□ 0.06
LIG1-208ENST00000595758 PPP3CAQ08209 521 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms