RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
UPF1-203ENST00000594504 INSL5Q9Y5Q6 135 aa13.6□□□□□ -0.23
UPF1-203ENST00000594504 PIEZO1Q92508 2521 aa13.6□□□□□ -0.23
UPF1-203ENST00000594504 SHISA7A6NL88 538 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 CLDN3O15551 220 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 ECI2O75521 394 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 OR4Q2P0C623 313 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 STAT6P42226 847 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 PRKCQQ04759 706 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 TWF1Q12792 350 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 FAM78AQ5JUQ0 283 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 ZBTB41Q5SVQ8 909 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 SHC4Q6S5L8 630 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 TPRG1Q6ZUI0 275 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 LTB4R2Q9NPC1 389 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 SPATA6Q9NWH7 488 aaPredicted RBP13.59□□□□□ -0.23
UPF1-203ENST00000594504 GDE1Q9NZC3 331 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 ODF2LQ9ULJ1 636 aa13.59□□□□□ -0.23
UPF1-203ENST00000594504 A0A087X0B3 334 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 LACTBL1A8MY62 500 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 MOSPD3O75425 235 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 VNN2O95498 520 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 MYL4P12829 197 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 FCARP24071 287 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 TARSP26639 723 aaKnown RBP13.58□□□□□ -0.24
UPF1-203ENST00000594504 ID4P47928 161 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 CDR1P51861 262 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 NCKAP1LP55160 1127 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 PFKPQ01813 784 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 MCL1Q07820 350 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 ZNF280DQ6N043 979 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 HAUS6Q7Z4H7 955 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 GPIHBP1Q8IV16 184 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 KIAA2013Q8IYS2 634 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 KIF12Q96FN5 646 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 BICD1Q96G01 975 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 CHAMP1Q96JM3 812 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 ZNF512Q96ME7 567 aaPredicted RBP13.58□□□□□ -0.24
UPF1-203ENST00000594504 PGLYRP2Q96PD5 576 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 BCO2Q9BYV7 579 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
UPF1-203ENST00000594504 FAM13BQ9NYF5 915 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 KCNG1Q9UIX4 513 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 PCDHB8Q9UN66 801 aa13.58□□□□□ -0.24
UPF1-203ENST00000594504 TTC26A0AVF1 554 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 PPEF2O14830 753 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 KRT18P05783 430 aaKnown RBP13.57□□□□□ -0.24
UPF1-203ENST00000594504 CPB1P15086 417 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 VIPR2P41587 438 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 CSTF1Q05048 431 aaKnown RBP13.57□□□□□ -0.24
UPF1-203ENST00000594504 FZD5Q13467 585 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 ZBTB6Q15916 424 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 CYP4A22Q5TCH4 519 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 RESP18Q5W5W9 173 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 TPGS2Q68CL5 300 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 TSSK4Q6SA08 328 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 ZPBP2Q6X784 338 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 PDZD4Q76G19 769 aaPredicted RBP13.57□□□□□ -0.24
UPF1-203ENST00000594504 SV2BQ7L1I2 683 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 PDILTQ8N807 584 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 APPL2Q8NEU8 664 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 ELSPBP1Q96BH3 223 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 PANK2Q9BZ23 570 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 CRISPLD1Q9H336 500 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 SEMA4AQ9H3S1 761 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 CUEDC2Q9H467 287 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 ZFP14Q9HCL3 533 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 LARSQ9P2J5 1176 aaKnown RBP13.57□□□□□ -0.24
UPF1-203ENST00000594504 AFF4Q9UHB7 1163 aaKnown RBP13.57□□□□□ -0.24
UPF1-203ENST00000594504 FANCMQ8IYD8 2048 aa13.57□□□□□ -0.24
UPF1-203ENST00000594504 PATJQ8NI35 1801 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 M0QZQ0 153 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 ZNF197O14709 1029 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 LAMTOR5O43504 91 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 TBCAO75347 108 aaKnown RBP13.56□□□□□ -0.24
UPF1-203ENST00000594504 FAM13AO94988 1023 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 CLTAP09496 248 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 LRPAP1P30533 357 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 LIG4P49917 911 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 ZNF131P52739 623 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 TEAD2Q15562 447 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 E2F4Q16254 413 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 ADALQ6DHV7 355 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 IQCEQ6IPM2 695 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 VITQ6UXI7 678 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 DSTYKQ6XUX3 929 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 IQUBQ8NA54 791 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 SUMF1Q8NBK3 374 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 ASB16Q96NS5 453 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 HINFPQ9BQA5 517 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 PYM1Q9BRP8 204 aaKnown RBP13.56□□□□□ -0.24
UPF1-203ENST00000594504 OSBPL6Q9BZF3 934 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 ZHX3Q9H4I2 956 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 BRD9Q9H8M2 597 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 PLEKHA5Q9HAU0 1116 aa13.56□□□□□ -0.24
UPF1-203ENST00000594504 TBX20Q9UMR3 447 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms