RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 FRMD4BQ9Y2L6 1034 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 LILRB3O75022 631 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 BMP6P22004 513 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 DUSP6Q16828 381 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 C9orf57Q5W0N0 161 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 CENPPQ6IPU0 288 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 CEP57Q86XR8 500 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 DHTKD1Q96HY7 919 aaPredicted RBP21.16■□□□□ 0.98
LSM4-203ENST00000593829 TSG101Q99816 390 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 ANO10Q9NW15 660 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 KIF2AO00139 706 aaPredicted RBP21.16■□□□□ 0.98
LSM4-203ENST00000593829 PSMA7O14818 248 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 TMEM191BP0C7N4 346 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 WDR49Q8IV35 697 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 RIN2Q8WYP3 895 aaPredicted RBP21.16■□□□□ 0.98
LSM4-203ENST00000593829 CCDC127Q96BQ5 260 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 EMILIN2Q9BXX0 1053 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 INTS13Q9NVM9 706 aa21.16■□□□□ 0.98
LSM4-203ENST00000593829 ANO9A1A5B4 782 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 I3L4J1 428 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 PIRO00625 290 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 DLATP10515 647 aaKnown RBP21.15■□□□□ 0.98
LSM4-203ENST00000593829 ADAM9Q13443 819 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 COL19A1Q14993 1142 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 RTP2Q5QGT7 225 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 EFHBQ8N7U6 833 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 HLA-CQ95604 372 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 PABPC5Q96DU9 382 aaKnown RBP21.15■□□□□ 0.98
LSM4-203ENST00000593829 ANKRD36BP1Q96IX9 119 aa21.15■□□□□ 0.98
LSM4-203ENST00000593829 SPDYE4A6NLX3 237 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 CD44P16070 742 aaKnown RBP21.14■□□□□ 0.98
LSM4-203ENST00000593829 TNNI1P19237 187 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 FGFR3P22607 806 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 PAX3P23760 479 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 CASP4P49662 377 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 DUOXA2Q1HG44 320 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 LMBRD2Q68DH5 695 aaPredicted RBP21.14■□□□□ 0.98
LSM4-203ENST00000593829 SUSD3Q96L08 255 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 MTMR12Q9C0I1 747 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.14■□□□□ 0.98
LSM4-203ENST00000593829 CLDND1Q9NY35 253 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 COG5Q9UP83 839 aa21.14■□□□□ 0.98
LSM4-203ENST00000593829 PPP1R3GB7ZBB8 358 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 PPEF2O14830 753 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 MAPK13O15264 365 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 TNNC2P02585 160 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 CNPP09543 421 aaKnown RBP21.14■□□□□ 0.97
LSM4-203ENST00000593829 CCNE1P24864 410 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 GSDMDP57764 484 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 LILRA4P59901 499 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 CREMQ03060 361 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 LRRC63Q05C16 580 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 ADAM15Q13444 863 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 CTC1Q2NKJ3 1217 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 PDXDC1Q6P996 788 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 C11orf57Q6ZUT1 292 aaPredicted RBP21.14■□□□□ 0.97
LSM4-203ENST00000593829 C1orf127Q8N9H9 656 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 PIK3R5Q8WYR1 880 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 KLHL5Q96PQ7 755 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 CGRRF1Q99675 332 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 RXFP1Q9HBX9 757 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 ITGA11Q9UKX5 1188 aa21.14■□□□□ 0.97
LSM4-203ENST00000593829 PTPRJQ12913 1337 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 SYN3O14994 580 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 CLASP2O75122 1294 aaKnown RBP21.13■□□□□ 0.97
LSM4-203ENST00000593829 TKTP29401 623 aaKnown RBP21.13■□□□□ 0.97
LSM4-203ENST00000593829 ANKRD40Q6AI12 368 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 EP400NLQ6ZTU2 488 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 CSGALNACT2Q8N6G5 542 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 OR5B17Q8NGF7 314 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 FAM84AQ96KN4 292 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 POP1Q99575 1024 aaKnown RBP21.13■□□□□ 0.97
LSM4-203ENST00000593829 PRDM6Q9NQX0 595 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 IMPACTQ9P2X3 320 aa21.13■□□□□ 0.97
LSM4-203ENST00000593829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 CETN3O15182 167 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 AKAP3O75969 853 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 ITGB3P05106 788 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 PSMC2P35998 433 aaKnown RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 AARSP49588 968 aaKnown RBP eCLIP21.12■□□□□ 0.97
LSM4-203ENST00000593829 PMS1P54277 932 aaKnown RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 KLHL10Q6JEL2 608 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 PRSS55Q6UWB4 352 aaPredicted RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 ZNF397Q8NF99 534 aaPredicted RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 LNX1Q8TBB1 728 aaPredicted RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 PARD3BQ8TEW8 1205 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 UBE2ZQ9H832 354 aaPredicted RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 FNIP2Q9P278 1114 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 PRUNE2Q8WUY3 3088 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 M0QZQ0 153 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 LINC01565O15544 149 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 ADH1AP07327 375 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 KLRC2P26717 231 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 POLR2BP30876 1174 aaKnown RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 TAF6P49848 677 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 RBP5P82980 135 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 CCZ1BP86790 482 aa21.12■□□□□ 0.97
LSM4-203ENST00000593829 CCZ1P86791 482 aaPredicted RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 FKBP3Q00688 224 aaKnown RBP21.12■□□□□ 0.97
LSM4-203ENST00000593829 PSMD5Q16401 504 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms