RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 STXBP5Q5T5C0 1151 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 TPGS2Q68CL5 300 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 ZNF280DQ6N043 979 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 ZBTB44Q8NCP5 570 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 REEP2Q9BRK0 252 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 MKNK1Q9BUB5 465 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 TIPINQ9BVW5 301 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 BCO2Q9BYV7 579 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 IKZF4Q9H2S9 585 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 DAXXQ9UER7 740 aaPredicted RBP11.63□□□□□ -0.55
USE1-203ENST00000593597 FBXO4Q9UKT5 387 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 NUB1Q9Y5A7 615 aa11.63□□□□□ -0.55
USE1-203ENST00000593597 ZNF638Q14966 1978 aaKnown RBP11.62□□□□□ -0.55
USE1-203ENST00000593597 LACTBL1A8MY62 500 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 TISP43B9A030 160 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 H7C4K7 107 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 SPTLC1O15269 473 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 LAMTOR5O43504 91 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 SOAT2O75908 522 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 MICAL2O94851 1124 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 PIGRP01833 764 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 ADRB2P07550 413 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 HOXC13P31276 330 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 ELF1P32519 619 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 RPS9P46781 194 aaKnown RBP11.62□□□□□ -0.55
USE1-203ENST00000593597 ZNF131P52739 623 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 FOXK2Q01167 660 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 MTAPQ13126 283 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 GAS6Q14393 721 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 TEAD2Q15562 447 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 RILPL1Q5EBL4 403 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 PDZD4Q76G19 769 aaPredicted RBP11.62□□□□□ -0.55
USE1-203ENST00000593597 ERMP1Q7Z2K6 904 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 DNASE1L2Q92874 299 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 TMX3Q96JJ7 454 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 LRRC3BQ96PB8 259 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 PGLYRP2Q96PD5 576 aa11.62□□□□□ -0.55
USE1-203ENST00000593597 ZNF334Q9HCZ1 680 aaPredicted RBP11.62□□□□□ -0.55
USE1-203ENST00000593597 KMT2BQ9UMN6 2715 aaPredicted RBP11.62□□□□□ -0.55
USE1-203ENST00000593597 GREB1Q4ZG55 1949 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 ANAPC1Q9H1A4 1944 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 MTMR11A4FU01 709 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 CLDN3O15551 220 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 OAZ2O95190 189 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 MYL4P12829 197 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 CPB1P15086 417 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 TGM1P22735 817 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 GJB2P29033 226 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 CDR1P51861 262 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 STRN3Q13033 797 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 MCTP1Q6DN14 999 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 ZC3H14Q6PJT7 736 aaKnown RBP11.61□□□□□ -0.55
USE1-203ENST00000593597 HAUS6Q7Z4H7 955 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 OR10T2Q8NGX3 314 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 ZSCAN18Q8TBC5 510 aaPredicted RBP11.61□□□□□ -0.55
USE1-203ENST00000593597 RUBCNQ92622 972 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 SMARCD2Q92925 531 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 PLEKHA5Q9HAU0 1116 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 TRPV4Q9HBA0 871 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 ZFP14Q9HCL3 533 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 DLL3Q9NYJ7 618 aa11.61□□□□□ -0.55
USE1-203ENST00000593597 NDRG2Q9UN36 371 aaKnown RBP11.61□□□□□ -0.55
USE1-203ENST00000593597 RALGAPA1Q6GYQ0 2036 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 ATG2BQ96BY7 2078 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 A0A0B4J269 797 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 A0A1W2PRU2 124 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 ANKRD63C9JTQ0 380 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 ZNF197O14709 1029 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 KINO60870 393 aaKnown RBP11.6□□□□□ -0.55
USE1-203ENST00000593597 NFICP08651 508 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 CLTAP09496 248 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 CYP3A5P20815 502 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 GDI1P31150 447 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 MAGEA9P43362 315 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 SOX9P48436 509 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 WNT7BP56706 349 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 YWHAHQ04917 246 aaPredicted RBP11.6□□□□□ -0.55
USE1-203ENST00000593597 DUSP4Q13115 394 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 MCM6Q14566 821 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 SPATA1Q5VX52 437 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 SCARA3Q6AZY7 606 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 JADE1Q6IE81 842 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 CENPPQ6IPU0 288 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 ZNF852Q6ZMS4 543 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 GAREM2Q75VX8 874 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 GPBP1Q86WP2 473 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 GPIHBP1Q8IV16 184 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 APPL2Q8NEU8 664 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 TRMT61BQ9BVS5 477 aaKnown RBP11.6□□□□□ -0.55
USE1-203ENST00000593597 EPC1Q9H2F5 836 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 CHRDQ9H2X0 955 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 BRD9Q9H8M2 597 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 C2orf42Q9NWW7 574 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 KCND2Q9NZV8 630 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 CPSF3Q9UKF6 684 aaKnown RBP11.6□□□□□ -0.55
USE1-203ENST00000593597 TBX20Q9UMR3 447 aa11.6□□□□□ -0.55
USE1-203ENST00000593597 UBQLN1Q9UMX0 589 aaKnown RBP11.6□□□□□ -0.55
USE1-203ENST00000593597 PCDHGA2Q9Y5H1 932 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms