RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 BCO2Q9BYV7 579 aa12.38□□□□□ -0.43
CACNA1A-213ENST00000593267 UBE2OQ9C0C9 1292 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-213ENST00000593267 ELAC1Q9H777 363 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-213ENST00000593267 TMEM39AQ9NV64 488 aa12.38□□□□□ -0.43
CACNA1A-213ENST00000593267 SLC38A7Q9NVC3 462 aa12.38□□□□□ -0.43
CACNA1A-213ENST00000593267 AGAP1Q9UPQ3 857 aa12.38□□□□□ -0.43
CACNA1A-213ENST00000593267 CNTN6Q9UQ52 1028 aa12.38□□□□□ -0.43
CACNA1A-213ENST00000593267 BZW2Q9Y6E2 419 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-213ENST00000593267 ESPNB1AK53 854 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 PIRO00625 290 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 NDUFA10O95299 355 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 CCDC172P0C7W6 258 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 ACO1P21399 889 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 MSNP26038 577 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 CYLC1P35663 651 aaPredicted RBP12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 EIF4A3P38919 411 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 ASPAP45381 313 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 TDRD12Q587J7 1177 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 ZNF667Q5HYK9 610 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 C9orf57Q5W0N0 161 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 TOGARAM2Q6ZUX3 1019 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 GPIHBP1Q8IV16 184 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 HPDLQ96IR7 371 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 SYT11Q9BT88 431 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 HAUS4Q9H6D7 363 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 RNF19AQ9NV58 838 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 MIOSQ9NXC5 875 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 SCN1AP35498 2009 aa12.37□□□□□ -0.43
CACNA1A-213ENST00000593267 TRIM43BA6NCK2 446 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 EIF3CLB5ME19 914 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 ENPP3O14638 875 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 PPEF2O14830 753 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 LCA5LO95447 670 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 TIMP1P01033 207 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 THP07101 528 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 ANXA13P27216 316 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 CLCN1P35523 988 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 PNPLA4P41247 253 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 SCNN1GP51170 649 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 ARID5AQ03989 594 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 PTK2Q05397 1052 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 GRIK3Q13003 919 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 WDR72Q3MJ13 1102 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 LRIT3Q3SXY7 679 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 Q7L0L9 218 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 TET1Q8NFU7 2136 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 OLIG1Q8TAK6 271 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 TRIM43Q96BQ3 446 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 VWCEQ96DN2 955 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 ZNF560Q96MR9 790 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 EIF3CQ99613 913 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 FAM124BQ9H5Z6 455 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 GOLGA2P5Q9HBQ8 144 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 TMEM161AQ9NX61 479 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 POLIQ9UNA4 740 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 R3HCC1Q9Y3T6 440 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 ADGRG1Q9Y653 693 aa12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 EPN1Q9Y6I3 576 aaPredicted RBP12.36□□□□□ -0.43
CACNA1A-213ENST00000593267 TSC2P49815 1807 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 OFD1O75665 1012 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 CLSTN1O94985 981 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 P4HA1P13674 534 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 KIF11P52732 1056 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 ZNF132P52740 706 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 YWHAEP62258 255 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 CNKSR3Q6P9H4 555 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 ZNF571Q7Z3V5 609 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 CCAR2Q8N163 923 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 CRIPAKQ8N1N5 446 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 RNF169Q8NCN4 708 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 DESI2Q9BSY9 194 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 CYP3A43Q9HB55 503 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 NOCTQ9UK39 431 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 PPP2R2CQ9Y2T4 447 aa12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 REXO2Q9Y3B8 237 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-213ENST00000593267 FNDC1Q4ZHG4 1894 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 TTC3P53804 2025 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 ZNF263O14978 683 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 CYP26A1O43174 497 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 CCP110O43303 1012 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 ZNF500O60304 480 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 CCDC175P0C221 793 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 KRT5P13647 590 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 ITGB8P26012 769 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 USP8P40818 1118 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 TAF6P49848 677 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 TNNC1P63316 161 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 BMS1Q14692 1282 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 GLB1LQ6UWU2 654 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 DEFB128Q7Z7B8 93 aa12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 C17orf53Q8N3J3 647 aaPredicted RBP12.34□□□□□ -0.43
CACNA1A-213ENST00000593267 RBBP8NLQ8NC74 664 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms