RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 A0A1B0GTW7 788 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 GAGE12BA1L429 117 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 CTNND1O60716 968 aaKnown RBP6.18□□□□□ -1.42
SMAD4-216ENST00000593223 SLC43A1O75387 559 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 ERN1O75460 977 aaKnown RBP6.18□□□□□ -1.42
SMAD4-216ENST00000593223 PRSS23O95084 383 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 NDUFA10O95299 355 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 FTH1P19P0C7X4 201 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 MYBP10242 640 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 LAG3P18627 525 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 GCSHP23434 173 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 SLC6A4P31645 630 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 NOMO3P69849 1222 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 SPDYE7PQ495Y7 208 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 TIGD2Q4W5G0 525 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 ARHGAP29Q52LW3 1261 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 CCDC93Q567U6 631 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 NOMO2Q5JPE7 1267 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 METRNLQ641Q3 311 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 NXNQ6DKJ4 435 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 ZNF365Q70YC5 407 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 TCEAL8Q8IYN2 117 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 MAGEB6Q8N7X4 407 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 ZNF483Q8TF39 744 aaPredicted RBP6.18□□□□□ -1.42
SMAD4-216ENST00000593223 NUP133Q8WUM0 1156 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 TNPO1Q92973 898 aaKnown RBP6.18□□□□□ -1.42
SMAD4-216ENST00000593223 MARS2Q96GW9 593 aaKnown RBP6.18□□□□□ -1.42
SMAD4-216ENST00000593223 FAM167AQ96KS9 214 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 TAAR9Q96RI9 348 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 ACO2Q99798 780 aaKnown RBP6.18□□□□□ -1.42
SMAD4-216ENST00000593223 BRD9Q9H8M2 597 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 ARMT1Q9H993 441 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 KLHL11Q9NVR0 708 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 PNPOQ9NVS9 261 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 SIDT1Q9NXL6 827 aaKnown RBP6.18□□□□□ -1.42
SMAD4-216ENST00000593223 STXBP5LQ9Y2K9 1186 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 MTO1Q9Y2Z2 717 aaKnown RBP6.18□□□□□ -1.42
SMAD4-216ENST00000593223 AATKQ6ZMQ8 1374 aa6.18□□□□□ -1.42
SMAD4-216ENST00000593223 NT5C1B-RDH14C9J2C7 533 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 PPFIA4O75335 1185 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 ZNF202O95125 648 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 GPANK1O95872 356 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 C6P13671 934 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 TYRP14679 529 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 PRDX5P30044 214 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 IL12RB1P42701 662 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 PHKA1P46020 1223 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 PIK3CGP48736 1102 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 HSD11B2P80365 405 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 MAPKAPK5Q8IW41 473 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 ZFPM1Q8IX07 1006 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 KLHDC4Q8TBB5 520 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 SLC35A4Q96G79 324 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 PNKPQ96T60 521 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 IMPG2Q9BZV3 1241 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 RNF181Q9P0P0 153 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 CFAP97Q9P2B7 532 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 USP25Q9UHP3 1055 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 SLC45A2Q9UMX9 530 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 MAP3K2Q9Y2U5 619 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 PCDHA1Q9Y5I3 950 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 NOX1Q9Y5S8 564 aa6.17□□□□□ -1.42
SMAD4-216ENST00000593223 H3BML4 177 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 GJB1P08034 283 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 ATF3P18847 181 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 MAKP20794 623 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 TACR2P21452 398 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 FGFR4P22455 802 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 NR4A1P22736 598 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 PSMC1P62191 440 aaKnown RBP6.16□□□□□ -1.42
SMAD4-216ENST00000593223 CRIP3Q6Q6R5 217 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 B3GNT9Q6UX72 402 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 DAAM2Q86T65 1068 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 ZBTB34Q8NCN2 500 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 SLC17A8Q8NDX2 589 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 CPEB3Q8NE35 698 aaKnown RBP6.16□□□□□ -1.42
SMAD4-216ENST00000593223 PPP1R35Q8TAP8 253 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 BRIX1Q8TDN6 353 aaKnown RBP6.16□□□□□ -1.42
SMAD4-216ENST00000593223 RNF31Q96EP0 1072 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 CNNM1Q9NRU3 951 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 FZD1Q9UP38 647 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 CDYLQ9Y232 598 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 HS3ST3A1Q9Y663 406 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 NUP160Q12769 1436 aa6.16□□□□□ -1.42
SMAD4-216ENST00000593223 GLI2P10070 1586 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 LTBP4Q8N2S1 1624 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 PLEKHD1A6NEE1 506 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 ERC2O15083 957 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 UBXN7O94888 489 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 ABHD16AO95870 558 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 DDX6P26196 483 aaKnown RBP eCLIP6.15□□□□□ -1.42
SMAD4-216ENST00000593223 HTR1BP28222 390 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 MCM7P33993 719 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 OCA2Q04671 838 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 RESTQ13127 1097 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 PLS1Q14651 629 aa6.15□□□□□ -1.42
SMAD4-216ENST00000593223 GFOD2Q3B7J2 385 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms