RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-221ENST00000593026 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-221ENST00000593026 C1orf220Q5T0J3 134 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 TCERG1LQ5VWI1 586 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 PDXDC1Q6P996 788 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 RBM23Q86U06 439 aaKnown RBP16.09■□□□□ 0.17
DDX39A-221ENST00000593026 GPR65Q8IYL9 337 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 APPL2Q8NEU8 664 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 PIK3R5Q8WYR1 880 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 SENP8Q96LD8 212 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 MED15Q96RN5 788 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 EMILIN2Q9BXX0 1053 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
DDX39A-221ENST00000593026 ARMCX3Q9UH62 379 aaPredicted RBP16.09■□□□□ 0.17
DDX39A-221ENST00000593026 PCDHB8Q9UN66 801 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 VWA8A3KMH1 1905 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 SCN1AP35498 2009 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 ARHGEF37A1IGU5 675 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 KPNA7A9QM74 516 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 PER2O15055 1255 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 STX10O60499 249 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 LILRB3O75022 631 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 LETM1O95202 739 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-221ENST00000593026 GNA14O95837 355 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 C4BPAP04003 597 aaKnown RBP16.08■□□□□ 0.16
DDX39A-221ENST00000593026 ODC1P11926 461 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 TYRO3Q06418 890 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 HYAL1Q12794 435 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 MYO1EQ12965 1108 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 TRPC3Q13507 836 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 SKIV2LQ15477 1246 aaKnown RBP16.08■□□□□ 0.16
DDX39A-221ENST00000593026 NFKBIBQ15653 356 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 PSMD5Q16401 504 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 DUSP6Q16828 381 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 ZACNQ401N2 412 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 TDRD10Q5VZ19 366 aaKnown RBP16.08■□□□□ 0.16
DDX39A-221ENST00000593026 SCARA3Q6AZY7 606 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 PRSS55Q6UWB4 352 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-221ENST00000593026 ANKS3Q6ZW76 656 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 FRMD5Q7Z6J6 570 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 HPDLQ96IR7 371 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 CDCA3Q99618 268 aaPredicted RBP16.08■□□□□ 0.16
DDX39A-221ENST00000593026 IGFLR1Q9H665 355 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
DDX39A-221ENST00000593026 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX39A-221ENST00000593026 MYO7AQ13402 2215 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 FSD2A1L4K1 749 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 CYB561D2O14569 222 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 CST3P01034 146 aaPredicted RBP16.07■□□□□ 0.16
DDX39A-221ENST00000593026 CNPP09543 421 aaKnown RBP16.07■□□□□ 0.16
DDX39A-221ENST00000593026 KLRC2P26717 231 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 GTF2H1P32780 548 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 GCLMP48507 274 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 MCCD1P59942 119 aaPredicted RBP16.07■□□□□ 0.16
DDX39A-221ENST00000593026 PPP3CAQ08209 521 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 VARS2Q5ST30 1063 aaKnown RBP16.07■□□□□ 0.16
DDX39A-221ENST00000593026 SV2AQ7L0J3 742 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 LNX1Q8TBB1 728 aaPredicted RBP16.07■□□□□ 0.16
DDX39A-221ENST00000593026 KLHL5Q96PQ7 755 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 RXFP1Q9HBX9 757 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 TMEM8AQ9HCN3 771 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 FNIP2Q9P278 1114 aa16.07■□□□□ 0.16
DDX39A-221ENST00000593026 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
DDX39A-221ENST00000593026 H7C4K7 107 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 TEX28O15482 410 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 NCK2O43639 380 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 CLASP2O75122 1294 aaKnown RBP16.06■□□□□ 0.16
DDX39A-221ENST00000593026 CLSTN1O94985 981 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 ADH1AP07327 375 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 CCDC192P0DO97 292 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 RPL17P18621 184 aaKnown RBP16.06■□□□□ 0.16
DDX39A-221ENST00000593026 TYMPP19971 482 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 ATICP31939 592 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 GTF2F1P35269 517 aaKnown RBP eCLIP16.06■□□□□ 0.16
DDX39A-221ENST00000593026 PIK3CAP42336 1068 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 NDUFV1P49821 464 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 MXI1P50539 228 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 MYL6P60660 151 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 YWHAHQ04917 246 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-221ENST00000593026 NCOA4Q13772 614 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 KRT39Q6A163 491 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 C11orf57Q6ZUT1 292 aaPredicted RBP16.06■□□□□ 0.16
DDX39A-221ENST00000593026 EFHBQ8N7U6 833 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 SLC35C1Q96A29 364 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 GDAP2Q9NXN4 497 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 MTRRQ9UBK8 725 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 DSEQ9UL01 958 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
DDX39A-221ENST00000593026 SYCE3A1L190 88 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 VNN1O95497 513 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 MARSP56192 900 aaKnown RBP16.05■□□□□ 0.16
DDX39A-221ENST00000593026 ZNF699Q32M78 642 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 CTXN3Q4LDR2 81 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 ZNF280DQ6N043 979 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 EP400NLQ6ZTU2 488 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 PPFIBP1Q86W92 1011 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 METTL23Q86XA0 190 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 GLYCTKQ8IVS8 523 aa16.05■□□□□ 0.16
DDX39A-221ENST00000593026 TRIM59Q8IWR1 403 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms