RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 CPSF3Q9UKF6 684 aaKnown RBP12.86□□□□□ -0.35
DDX39A-219ENST00000592927 FRMD4BQ9Y2L6 1034 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 DMXL1Q9Y485 3027 aa12.86□□□□□ -0.35
DDX39A-219ENST00000592927 A0A1W2PQC6 194 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 LGALS16A8MUM7 142 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 MAPK13O15264 365 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 INPPL1O15357 1258 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 EXOC3O60645 756 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 POMCP01189 267 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 LINC00271P0C7V0 271 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 CXCL8P10145 99 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 PBX1P40424 430 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 SCNN1GP51170 649 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
DDX39A-219ENST00000592927 RNASELQ05823 741 aaKnown RBP12.85□□□□□ -0.35
DDX39A-219ENST00000592927 ENOX2Q16206 610 aaKnown RBP12.85□□□□□ -0.35
DDX39A-219ENST00000592927 SLC10A6Q3KNW5 377 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 SPECC1LQ69YQ0 1117 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 ASTLQ6HA08 431 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-219ENST00000592927 CRELD2Q6UXH1 353 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-219ENST00000592927 RBM23Q86U06 439 aaKnown RBP12.85□□□□□ -0.35
DDX39A-219ENST00000592927 CREBRFQ8IUR6 639 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 TRIM59Q8IWR1 403 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 LRRC43Q8N309 656 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 SPC24Q8NBT2 197 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 KREMEN2Q8NCW0 462 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 ZSWIM2Q8NEG5 633 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 PPP2R3CQ969Q6 453 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 FAM193BQ96PV7 902 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-219ENST00000592927 PLEKHA5Q9HAU0 1116 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 TBC1D13Q9NVG8 400 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 INTS13Q9NVM9 706 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 DLL3Q9NYJ7 618 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 TAB2Q9NYJ8 693 aa12.85□□□□□ -0.35
DDX39A-219ENST00000592927 RBAKQ9NYW8 714 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-219ENST00000592927 LACTBL1A8MY62 500 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 IL18RAPO95256 599 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 GLP2RO95838 553 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 THP07101 528 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 NRIP1P48552 1158 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 AFF1P51825 1210 aaKnown RBP12.84□□□□□ -0.35
DDX39A-219ENST00000592927 UBXN1Q04323 297 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 GRIK3Q13003 919 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 SNRNP35Q16560 246 aaKnown RBP12.84□□□□□ -0.35
DDX39A-219ENST00000592927 VWA3BQ502W6 1294 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 XKR4Q5GH76 650 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 FKBP15Q5T1M5 1219 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
DDX39A-219ENST00000592927 CEP135Q66GS9 1140 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 ALKAL1Q6UXT8 129 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 TMC6Q7Z403 805 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 CD302Q8IX05 232 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 RDH13Q8NBN7 331 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 GSTCDQ8NEC7 633 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 IQCDQ96DY2 449 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 NDST4Q9H3R1 872 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 MIOSQ9NXC5 875 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 ARMCX3Q9UH62 379 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-219ENST00000592927 RALYQ9UKM9 306 aaKnown RBP12.84□□□□□ -0.35
DDX39A-219ENST00000592927 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 RWDD3Q9Y3V2 267 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
DDX39A-219ENST00000592927 BAHCC1Q9P281 2608 aa12.84□□□□□ -0.35
DDX39A-219ENST00000592927 MYO7AQ13402 2215 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 SMIM28A0A1B0GU29 152 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 TTC26A0AVF1 554 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 PTGESO14684 152 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 TEX33O43247 280 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 AKAP3O75969 853 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 LMNAP02545 664 aaKnown RBP12.83□□□□□ -0.36
DDX39A-219ENST00000592927 KCNE1P15382 129 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 DNAJB1P25685 340 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 ENPEPQ07075 957 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 TRIM14Q14142 442 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 MIIPQ5JXC2 388 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 GLRA4Q5JXX5 417 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 FAM186BQ8IYM0 893 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 UBALD2Q8IYN6 164 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 SUSD6Q92537 303 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 EEF2KMTQ96G04 330 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 ERGIC2Q96RQ1 377 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 TSPAN18Q96SJ8 248 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 CXCL16Q9H2A7 254 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 ASB7Q9H672 318 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 AAASQ9NRG9 546 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 SLC38A7Q9NVC3 462 aa12.83□□□□□ -0.36
DDX39A-219ENST00000592927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
DDX39A-219ENST00000592927 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.83□□□□□ -0.362e-7■■□□□ 11.4
DDX39A-219ENST00000592927 PES1O00541 588 aaKnown RBP12.82□□□□□ -0.36
DDX39A-219ENST00000592927 MEFVO15553 781 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-219ENST00000592927 ADRB2P07550 413 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 TPM1P09493 284 aa12.82□□□□□ -0.36
DDX39A-219ENST00000592927 SP100P23497 879 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms