RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 DNAJC14Q6Y2X3 702 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 MASTLQ96GX5 879 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 NTPCRQ9BSD7 190 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 ZBTB21Q9ULJ3 1066 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 LRRC42Q9Y546 428 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 LTBP4Q8N2S1 1624 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 KLHL33A6NCF5 533 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 DNALI1O14645 258 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 EDF1O60869 148 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 DCTN3O75935 186 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 SMNDC1O75940 238 aaKnown RBP eCLIP15.74■□□□□ 0.111e-8■□□□□ 10.1
SMARCA4-219ENST00000592604 SARNPP82979 210 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 BLMHQ13867 455 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 RASA2Q15283 850 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 PCNX4Q63HM2 1172 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 MIS18BP1Q6P0N0 1132 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 LLGL2Q6P1M3 1020 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 DRICH1Q6PGQ1 229 aaPredicted RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 PHLDB2Q86SQ0 1253 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 FAM118BQ9BPY3 351 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 PAIP2Q9BPZ3 127 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 PI4K2AQ9BTU6 479 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 TRABDQ9H4I3 376 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 RNPEPL1Q9HAU8 725 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 SAYSD1Q9NPB0 183 aa15.74■□□□□ 0.11
SMARCA4-219ENST00000592604 NFASCO94856 1347 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 DENND3A2RUS2 1198 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 SPAG7O75391 227 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 CALB2P22676 271 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 ALDH3A1P30838 453 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 PSMC5P62195 406 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 MRPS9P82933 396 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 GHRHRQ02643 423 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 TBC1D10BQ4KMP7 808 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 LIN9Q5TKA1 542 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 DAB2IPQ5VWQ8 1189 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 SPIRE2Q8WWL2 714 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 VCPIP1Q96JH7 1222 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 C1orf112Q9NSG2 853 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 FBXO28Q9NVF7 368 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 COL11A2P13942 1736 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 TRAFD1O14545 582 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 LUC7L3O95232 432 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 T-ENOLP0DO92 83 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 DMP1Q13316 513 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 XKR9Q5GH70 373 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 SLC7A6OSQ96CW6 309 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 PPCSQ9HAB8 311 aa15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 MRPL47Q9HD33 250 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 NKX1-2Q9UD57 310 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 CORO1CQ9ULV4 474 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-219ENST00000592604 PEX11AO75192 247 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 ICAM1P05362 532 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 PTGER2P43116 358 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 MAMLD1Q13495 774 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 PLEKHA7Q6IQ23 1121 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 GSTA5Q7RTV2 222 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 GPD1LQ8N335 351 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 C10orf82Q8WW14 230 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 POMGNT1Q8WZA1 660 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 AGBL1Q96MI9 1066 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 KIFC3Q9BVG8 833 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 SLCO1B3Q9NPD5 702 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 GRID1Q9ULK0 1009 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 LIASO43766 372 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 MTMR1Q13613 665 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 PKN2Q16513 984 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 C2CD6Q53TS8 623 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 TRIM72Q6ZMU5 477 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 ARMCX6Q7L4S7 300 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 SH3TC2Q8TF17 1288 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 CLEC4DQ8WXI8 215 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 NAF1Q96HR8 494 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 SMC6Q96SB8 1091 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 CYLDQ9NQC7 956 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 KMT5AQ9NQR1 393 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 HAO1Q9UJM8 370 aa15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 RPL26L1Q9UNX3 145 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-219ENST00000592604 GARTP22102 1010 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 TARSP26639 723 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 DSG3P32926 999 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 PHF13Q86YI8 300 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 FAM13CQ8NE31 585 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 ZNF516Q92618 1163 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 KIAA1683Q9H0B3 1180 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 C17orf75Q9HAS0 396 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 CYP39A1Q9NYL5 469 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 CCPG1Q9ULG6 757 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 ALOX15BO15296 676 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 TYROBPO43914 113 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 CETN2P41208 172 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 RASSF2P50749 326 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 JAK3P52333 1124 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 CLDN10P78369 228 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 NFX1Q12986 1120 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 TAF11Q15544 211 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 CMPK2Q5EBM0 449 aa15.71■□□□□ 0.11
SMARCA4-219ENST00000592604 PLA2G4FQ68DD2 849 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms