RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 ZNF233A6NK53 670 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 ABLIM3O94929 683 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 RPN1P04843 607 aaKnown RBP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 C8AP07357 584 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 HNRNPA1P09651 372 aaKnown RBP eCLIP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 TFAMQ00059 246 aaKnown RBP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 YWHAHQ04917 246 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 KNOP1Q1ED39 458 aaKnown RBP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 UVSSAQ2YD98 709 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 CCDC149Q6ZUS6 474 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 RTL10Q7L3V2 364 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 CBWD2Q8IUF1 395 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 KIAA0895Q8NCT3 520 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 CACTINQ8WUQ7 758 aaKnown RBP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 C1QTNF1Q9BXJ1 281 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 PIDD1Q9HB75 910 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 WDR6Q9NNW5 1121 aaKnown RBP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 CGNQ9P2M7 1197 aaKnown RBP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 MUTYHQ9UIF7 546 aa17.74■□□□□ 0.43
CIRBP-233ENST00000591622 TIMM13Q9Y5L4 95 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-233ENST00000591622 VWA8A3KMH1 1905 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 WDR27A2RRH5 827 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 C2CD4DB7Z1M9 353 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 CLIC2O15247 247 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 PRR29P0C7W0 189 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 TYMPP19971 482 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 HOXA9P31269 272 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 ARPP19P56211 112 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 DPYDQ12882 1025 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 PPM1LQ5SGD2 360 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 USP37Q86T82 979 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 SLC7A14Q8TBB6 771 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 SENP8Q96LD8 212 aa17.73■□□□□ 0.43
CIRBP-233ENST00000591622 OXCT2Q9BYC2 517 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-233ENST00000591622 CIZ1Q9ULV3 898 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-233ENST00000591622 ODC1P11926 461 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 ATF2P15336 505 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 TAF6P49848 677 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 CYP2J2P51589 502 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 SURF1Q15526 300 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 SNRNP35Q16560 246 aaKnown RBP17.72■□□□□ 0.43
CIRBP-233ENST00000591622 TPGS2Q68CL5 300 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 OVOS1Q6IE37 1185 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 OTOP3Q7RTS5 596 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 C12orf56Q8IXR9 622 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 ZDHHC14Q8IZN3 488 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 FMR1NBQ8N0W7 255 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-233ENST00000591622 PLCD3Q8N3E9 789 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 C1orf127Q8N9H9 656 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 TDRD5Q8NAT2 981 aaKnown RBP17.72■□□□□ 0.43
CIRBP-233ENST00000591622 XXYLT1Q8NBI6 393 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 GOLGA5Q8TBA6 731 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 CCDC47Q96A33 483 aaKnown RBP17.72■□□□□ 0.43
CIRBP-233ENST00000591622 CCDC34Q96HJ3 373 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 CLUHO75153 1309 aa17.72■□□□□ 0.43
CIRBP-233ENST00000591622 NCOR1O75376 2440 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 ARHGEF37A1IGU5 675 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 KPNA7A9QM74 516 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 RHOBTB3O94955 611 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 ITGB3P05106 788 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 PNPLA4P41247 253 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 SV2CQ496J9 727 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 TCEAL8Q8IYN2 117 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 RDH13Q8NBN7 331 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 CXorf38Q8TB03 319 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 ACSF2Q96CM8 615 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-233ENST00000591622 BORCS6Q96GS4 357 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 ZNF560Q96MR9 790 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 INTS13Q9NVM9 706 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 ITGA11Q9UKX5 1188 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 AGAP1Q9UPQ3 857 aa17.71■□□□□ 0.43
CIRBP-233ENST00000591622 OR6C75A6NL08 312 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 CYB561D2O14569 222 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 PRRG1O14668 218 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 CCL16O15467 120 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 XYLBO75191 536 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 CYP11A1P05108 521 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 POU2F2P09086 479 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 TMEM191BP0C7N4 346 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 CPB1P15086 417 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 POLR2BP30876 1174 aaKnown RBP17.7■□□□□ 0.42
CIRBP-233ENST00000591622 ELF1P32519 619 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 SNW1Q13573 536 aaKnown RBP17.7■□□□□ 0.42
CIRBP-233ENST00000591622 CSGALNACT2Q8N6G5 542 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 LRRC52Q8N7C0 313 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 ENGASEQ8NFI3 743 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 FAM84AQ96KN4 292 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 MTMR12Q9C0I1 747 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 AFF4Q9UHB7 1163 aaKnown RBP17.7■□□□□ 0.42
CIRBP-233ENST00000591622 DSEQ9UL01 958 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 MAFFQ9ULX9 164 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 PTPRJQ12913 1337 aa17.7■□□□□ 0.42
CIRBP-233ENST00000591622 PDXKO00764 312 aa17.69■□□□□ 0.42
CIRBP-233ENST00000591622 EXOC3O60645 756 aa17.69■□□□□ 0.42
CIRBP-233ENST00000591622 GPR37L1O60883 481 aa17.69■□□□□ 0.42
CIRBP-233ENST00000591622 KIF20AO95235 890 aa17.69■□□□□ 0.42
CIRBP-233ENST00000591622 SEC24AO95486 1093 aa17.69■□□□□ 0.42
CIRBP-233ENST00000591622 RBP5P82980 135 aa17.69■□□□□ 0.42
CIRBP-233ENST00000591622 FAM160A1Q05DH4 1040 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms