RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SPATA21Q7Z572 469 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 PARVAQ9NVD7 372 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 H7C4K7 107 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 AARSP49588 968 aaKnown RBP eCLIP13.99□□□□□ -0.175e-6■□□□□ 9.7
SMARCA4-216ENST00000591545 SNRNP35Q16560 246 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 C16orf87Q6PH81 154 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 FBXO16Q8IX29 292 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 C18orf8Q96DM3 657 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 DSG3P32926 999 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 RAD23BP54727 409 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 AGBL2Q5U5Z8 902 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 DNERQ8NFT8 737 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 OR9Q1Q8NGQ5 310 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 ATL2Q8NHH9 583 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 SMYD3Q9H7B4 428 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 HMX1Q9NP08 348 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 FBXO2Q9UK22 296 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 SLIT1O75093 1534 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 NPHP3-ACAD11A0A0J9YXS1 232 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 RNF103-CHMP3A0A140T963 221 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 MAN1A2O60476 641 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 HOXC6P09630 235 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 TAF6P49848 677 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 DEFB115Q30KQ5 88 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 RASGRP2Q7LDG7 609 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 AGGF1Q8N302 714 aaeCLIP13.98□□□□□ -0.174e-6■■■■□ 20.3
SMARCA4-216ENST00000591545 RNF25Q96BH1 459 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 DPP7Q9UHL4 492 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 ESYT3A0FGR9 886 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 RTN2O75298 545 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 TMEM132BQ14DG7 1078 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 ZBED8Q8IZ13 594 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 RNPC3Q96LT9 517 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 C7orf25Q9BPX7 421 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 NT5C1AQ9BXI3 368 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 UVRAGQ9P2Y5 699 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 ANTXR2P58335 489 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 ZNF211Q13398 564 aaPredicted RBP13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 ASPSCR1Q9BZE9 553 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 HDAC6Q9UBN7 1215 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 MAD2L2Q9UI95 211 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 PDGFRBP09619 1106 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 AKR1A1P14550 325 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 CYP11B2P19099 503 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 VSNL1P62760 191 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 CAPRIN2Q6IMN6 1127 aaKnown RBP13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 DCTN4Q9UJW0 460 aa13.98□□□□□ -0.17
SMARCA4-216ENST00000591545 PIK3R2O00459 728 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 ACADSBP45954 432 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 NPEPPSP55786 919 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 TPI1P60174 286 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 CCDC15Q0P6D6 951 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 EXT2Q93063 718 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 THOC1Q96FV9 657 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 AGPAT1Q99943 283 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 YIPF3Q9GZM5 350 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 PSD3Q9NYI0 1048 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 PITPNM2Q9BZ72 1349 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 SULT1E1P49888 294 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 TRADDQ15628 312 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 SLC18A3Q16572 532 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 DNAL1Q4LDG9 190 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 DACT2Q5SW24 774 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 SRLQ86TD4 932 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 CD302Q8IX05 232 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 SHCBP1Q8NEM2 672 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 DTNBP1Q96EV8 351 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 SGSM3Q96HU1 749 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 MTG1Q9BT17 334 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 OSBPL1AQ9BXW6 950 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 TRIM45Q9H8W5 580 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 SMAPO00193 183 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 DIAPH2O60879 1101 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 ODC1P11926 461 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 KCNA4P22459 653 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 TTC30BQ8N4P2 665 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 RMDN1Q96DB5 314 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 EIF3DO15371 548 aaKnown RBP eCLIP13.97□□□□□ -0.171e-8■□□□□ 9.3
SMARCA4-216ENST00000591545 EXTL3O43909 919 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 KRT4P19013 534 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 FXR2P51116 673 aaKnown RBP eCLIP13.97□□□□□ -0.176e-7■■■■□ 19.5
SMARCA4-216ENST00000591545 CYP4A22Q5TCH4 519 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 MOXD1Q6UVY6 613 aa13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 TTC7AQ9ULT0 858 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-216ENST00000591545 EIF3HO15372 352 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■□□□□ 8.3
SMARCA4-216ENST00000591545 CYP2C19P33261 490 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 CDH6P55285 790 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 CCZ1BP86790 482 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 CCZ1P86791 482 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 AP1B1Q10567 949 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 MTHFD1LQ6UB35 978 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 RASSF3Q86WH2 238 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 CDC26Q8NHZ8 85 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 SNX19Q92543 992 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 WDR24Q96S15 920 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 FAM129AQ9BZQ8 928 aa13.96□□□□□ -0.17
SMARCA4-216ENST00000591545 ENTPD7Q9NQZ7 604 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms