RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SYN3O14994 580 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 RPL9P32969 192 aaKnown RBP19.52■□□□□ 0.72
VAT1-208ENST00000590924 ASIC1P78348 528 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 CUL4BQ13620 913 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 PHLDB3Q6NSJ2 640 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 ZPBP2Q6X784 338 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 MTSS1LQ765P7 747 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 FGF14Q92915 247 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 ZBTB45Q96K62 511 aaPredicted RBP19.52■□□□□ 0.72
VAT1-208ENST00000590924 FIZ1Q96SL8 496 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 TBC1D17Q9HA65 648 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 ARHGEF3Q9NR81 526 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 ANKFY1Q9P2R3 1169 aa19.52■□□□□ 0.72
VAT1-208ENST00000590924 MEFVO15553 781 aaPredicted RBP19.51■□□□□ 0.71
VAT1-208ENST00000590924 RFX1P22670 979 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 ROR1Q01973 937 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 DPYDQ12882 1025 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 PSMD2Q13200 908 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 ALCAMQ13740 583 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 POSTNQ15063 836 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 VARS2Q5ST30 1063 aaKnown RBP19.51■□□□□ 0.71
VAT1-208ENST00000590924 PARM1Q6UWI2 310 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 ZNF720Q7Z2F6 126 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 HAUS6Q7Z4H7 955 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 ZNF461Q8TAF7 563 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 HVCN1Q96D96 273 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 HCFC1R1Q9NWW0 138 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 DNMT3BQ9UBC3 853 aaKnown RBP19.51■□□□□ 0.71
VAT1-208ENST00000590924 TSC2P49815 1807 aa19.51■□□□□ 0.71
VAT1-208ENST00000590924 PRR23AA6NEV1 266 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 STK25O00506 426 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 TBC1D4O60343 1298 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 ABLIM3O94929 683 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 HARSP12081 509 aaKnown RBP19.5■□□□□ 0.71
VAT1-208ENST00000590924 MCM4P33991 863 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 GTF2BQ00403 316 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 MCL1Q07820 350 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 EHHADHQ08426 723 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 ANGPT1Q15389 498 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 SLC10A6Q3KNW5 377 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 PABPC1LQ4VXU2 614 aaKnown RBP19.5■□□□□ 0.71
VAT1-208ENST00000590924 ASCL5Q7RTU5 278 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 SFR1Q86XK3 245 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 GRAMD1CQ8IYS0 662 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 ITFG1Q8TB96 612 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 CCDC47Q96A33 483 aaKnown RBP19.5■□□□□ 0.71
VAT1-208ENST00000590924 C18orf25Q96B23 403 aaPredicted RBP19.5■□□□□ 0.71
VAT1-208ENST00000590924 SUSD3Q96L08 255 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 RPP25Q9BUL9 199 aaKnown RBP19.5■□□□□ 0.71
VAT1-208ENST00000590924 STRA6Q9BX79 667 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 BLZF1Q9H2G9 400 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 NUB1Q9Y5A7 615 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 PCDHB13Q9Y5F0 798 aa19.5■□□□□ 0.71
VAT1-208ENST00000590924 SCN1AP35498 2009 aa19.49■□□□□ 0.71
VAT1-208ENST00000590924 ARHGEF37A1IGU5 675 aa19.49■□□□□ 0.71
VAT1-208ENST00000590924 WDR27A2RRH5 827 aa19.49■□□□□ 0.71
VAT1-208ENST00000590924 H7C4K7 107 aa19.49■□□□□ 0.71
VAT1-208ENST00000590924 CLDN3O15551 220 aa19.49■□□□□ 0.71
VAT1-208ENST00000590924 KLRC4O43908 158 aa19.49■□□□□ 0.71
VAT1-208ENST00000590924 MRPL58Q14197 206 aaKnown RBP19.49■□□□□ 0.71
VAT1-208ENST00000590924 STXBP4Q6ZWJ1 553 aa19.49■□□□□ 0.71
VAT1-208ENST00000590924 NPAS3Q8IXF0 933 aa19.49■□□□□ 0.71
VAT1-208ENST00000590924 ST13P5Q8NFI4 369 aaPredicted RBP19.49■□□□□ 0.71
VAT1-208ENST00000590924 GTPBP4Q9BZE4 634 aaKnown RBP19.49■□□□□ 0.71
VAT1-208ENST00000590924 MRPL44Q9H9J2 332 aaKnown RBP19.49■□□□□ 0.71
VAT1-208ENST00000590924 AVENQ9NQS1 362 aaPredicted RBP19.49■□□□□ 0.71
VAT1-208ENST00000590924 SMC2O95347 1197 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 RPN1P04843 607 aaKnown RBP19.48■□□□□ 0.71
VAT1-208ENST00000590924 ATF2P15336 505 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 PTMSP20962 102 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 CASP1P29466 404 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 GPC5P78333 572 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 KCNB1Q14721 858 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 SEZ6Q53EL9 994 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 FRMD5Q7Z6J6 570 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 SPATA20Q8TB22 786 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 NKD2Q969F2 451 aaPredicted RBP19.48■□□□□ 0.71
VAT1-208ENST00000590924 GSDMAQ96QA5 445 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 PLEKHA5Q9HAU0 1116 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 TBX20Q9UMR3 447 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.48■□□□□ 0.71
VAT1-208ENST00000590924 COL4A3Q01955 1670 aa19.48■□□□□ 0.71
VAT1-208ENST00000590924 DMDP11532 3685 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 TICRRQ7Z2Z1 1910 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.47■□□□□ 0.71
VAT1-208ENST00000590924 K7ENM7 598 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 PPP1R37O75864 691 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 RHOBTB3O94955 611 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 MBD3O95983 291 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 LRG1P02750 347 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 RHOP08100 348 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 CXCL8P10145 99 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 NMT1P30419 496 aaKnown RBP19.47■□□□□ 0.71
VAT1-208ENST00000590924 ELF1P32519 619 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 STARD6P59095 220 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 FAM26FQ5R3K3 315 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 TPGS2Q68CL5 300 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 TCEAL8Q8IYN2 117 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 SHDQ96IW2 340 aa19.47■□□□□ 0.71
VAT1-208ENST00000590924 HAPLN2Q9GZV7 340 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms