RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 STYK1Q6J9G0 422 aa18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 C1orf131Q8NDD1 294 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 RBM46Q8TBY0 533 aaKnown RBP18.05■□□□□ 0.48
SMARCA4-215ENST00000590574 AGPSO00116 658 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 TULP2O00295 520 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 PHKA2P46019 1235 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 CYP24A1Q07973 514 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 SMAD1Q15797 465 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 SGSM1Q2NKQ1 1148 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 HYIQ5T013 277 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 NOP9Q86U38 636 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 CERS5Q8N5B7 392 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 ETNPPLQ8TBG4 499 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 ZNRF3Q9ULT6 936 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 CHMP2BQ9UQN3 213 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 TMEM150BA6NC51 233 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 ASAP2O43150 1006 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 FSBPO95073 299 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 CYP3A4P08684 503 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 C1orf146Q5VVC0 180 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 MAGEB18Q96M61 343 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 OSBPL1AQ9BXW6 950 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 SMYD3Q9H7B4 428 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 POLE2P56282 527 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 SPDL1Q96EA4 605 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 C17orf75Q9HAS0 396 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 PIM2Q9P1W9 311 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 APOBEC2Q9Y235 224 aaKnown RBP18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 RNF169Q8NCN4 708 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 NSMCE1Q8WV22 266 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 ATG4CQ96DT6 458 aa18.04■□□□□ 0.48
SMARCA4-215ENST00000590574 KCNN4O15554 427 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 CST8O60676 142 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 RARRES1P49788 294 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 SV2AQ7L0J3 742 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 LBHD1Q9BQE6 289 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 LRRC4Q9HBW1 653 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 PCDHA3Q9Y5H8 950 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 XPOTO43592 962 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 UBOX5O94941 541 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 TTC4O95801 387 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 SLC20A2Q08357 652 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 ITKQ08881 620 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 KIF22Q14807 665 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 CNPY4Q8N129 248 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 MKL1Q969V6 931 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 TLK1Q9UKI8 766 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 PHTF1Q9UMS5 762 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 OSBPP22059 807 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 TARSP26639 723 aaKnown RBP18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 MMEL1Q495T6 779 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 EAPPQ56P03 285 aaPredicted RBP18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 SPOPLQ6IQ16 392 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 IQCKQ8N0W5 287 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 HES6Q96HZ4 224 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 SH3GL2Q99962 352 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 PCNX4Q63HM2 1172 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 KAT5Q92993 513 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 TEX13BQ9BXU2 312 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 NCANO14594 1321 aa18.03■□□□□ 0.48
SMARCA4-215ENST00000590574 APOL1O14791 398 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 SIX6OS1Q8N1H7 587 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 PGM2Q96G03 612 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 PROSCO94903 275 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 MAPTP10636 758 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 GHRP10912 638 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 PPP3CAQ08209 521 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 PAXIP1Q6ZW49 1069 aaPredicted RBP18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 RDM1Q8NG50 284 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 SPATA33Q96N06 139 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 PPCSQ9HAB8 311 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 HSPA4LO95757 839 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 GSTA1P08263 222 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 GEMIN4P57678 1058 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 PTK7Q13308 1070 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 AP1ARQ63HQ0 302 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 CAPRIN2Q6IMN6 1127 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 BZW1Q7L1Q6 419 aaKnown RBP18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 C4orf19Q8IY42 314 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 HACE1Q8IYU2 909 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 WDR18Q9BV38 432 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 DNAJC18Q9H819 358 aa18.02■□□□□ 0.48
SMARCA4-215ENST00000590574 MAFGO15525 162 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 GMNNO75496 209 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 KRT4P19013 534 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 MDH1BQ5I0G3 518 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 SH2D4BQ5SQS7 431 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 ZNF772Q68DY9 489 aaPredicted RBP18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 GPRASP2Q96D09 838 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 TSC22D3Q99576 134 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 VPS11Q9H270 941 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 ACP6Q9NPH0 428 aa18.02■□□□□ 0.47
SMARCA4-215ENST00000590574 SPDYE2BA6NHP3 402 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 PSMD10O75832 226 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 SPDYE6P0CI01 402 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 RXRBP28702 533 aa18.01■□□□□ 0.47
SMARCA4-215ENST00000590574 FLT3P36888 993 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms