RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 PBX3P40426 434 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 PIK3CAP42336 1068 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 UBASH3AP57075 661 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 UBE3AQ05086 875 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 NR1I3Q14994 352 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 ZNF699Q32M78 642 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 WDR72Q3MJ13 1102 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 SCARA3Q6AZY7 606 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 KLHL23Q8NBE8 558 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 C3orf58Q8NDZ4 430 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 LMO3Q8TAP4 145 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 SEMA4DQ92854 862 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 SUSD3Q96L08 255 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 C17orf80Q9BSJ5 609 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 C11orf84Q9BUA3 381 aaPredicted RBP13.08□□□□□ -0.32
DNMT1-218ENST00000589294 MARCH5Q9NX47 278 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 CACNG4Q9UBN1 327 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
DNMT1-218ENST00000589294 SF3B1O75533 1304 aaKnown RBP eCLIP13.08□□□□□ -0.32
DNMT1-218ENST00000589294 TMEM265A0A087WTH1 108 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 ARHGEF15O94989 841 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 ITGB1P05556 798 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 TPM3P06753 285 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 IGFBP6P24592 240 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-218ENST00000589294 UBXN1Q04323 297 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 TIGD5Q53EQ6 642 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 FUT10Q6P4F1 479 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 DSTYKQ6XUX3 929 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 LIMS2Q7Z4I7 341 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-218ENST00000589294 GPR65Q8IYL9 337 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 TMEM130Q8N3G9 435 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 APPL2Q8NEU8 664 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 SENP8Q96LD8 212 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 FAM81BQ96LP2 452 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 NAP1L5Q96NT1 182 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-218ENST00000589294 ERGIC2Q96RQ1 377 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 FAM124BQ9H5Z6 455 aaPredicted RBP13.07□□□□□ -0.32
DNMT1-218ENST00000589294 DSEQ9UL01 958 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 LAMA3Q16787 3333 aa13.07□□□□□ -0.32
DNMT1-218ENST00000589294 F8W810 466 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 H3BNC9 293 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 CYB561D2O14569 222 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 SYN3O14994 580 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 CBFA2T2O43439 604 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 HUS1O60921 280 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 SOD2P04179 222 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 TYMPP19971 482 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 PON1P27169 355 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 TNNC1P63316 161 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 BMS1Q14692 1282 aaKnown RBP13.06□□□□□ -0.32
DNMT1-218ENST00000589294 USP41Q3LFD5 358 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 FAM171A1Q5VUB5 890 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-218ENST00000589294 RNF168Q8IYW5 571 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-218ENST00000589294 TMEM86AQ8N2M4 240 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 TOP6BLQ8N6T0 577 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 SPATA18Q8TC71 538 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 SPPL3Q8TCT6 385 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 BCL7CQ8WUZ0 217 aaPredicted RBP13.06□□□□□ -0.32
DNMT1-218ENST00000589294 JAKMIP2Q96AA8 810 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 CRACR2AQ9BSW2 395 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 PI4K2AQ9BTU6 479 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 GPR62Q9BZJ7 368 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 INTS2Q9H0H0 1204 aaKnown RBP13.06□□□□□ -0.32
DNMT1-218ENST00000589294 CYP3A43Q9HB55 503 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 PLCB1Q9NQ66 1216 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 CHST7Q9NS84 486 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 GCNT4Q9P109 453 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 NXF1Q9UBU9 619 aaKnown RBP13.06□□□□□ -0.32
DNMT1-218ENST00000589294 SSX2IPQ9Y2D8 614 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 SNX9Q9Y5X1 595 aa13.06□□□□□ -0.32
DNMT1-218ENST00000589294 A0A1W2PQC6 194 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 TEX33O43247 280 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 TACC1O75410 805 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 OAZ2O95190 189 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 CYP11A1P05108 521 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 ODC1P11926 461 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 SLC9A1P19634 815 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 FGFR3P22607 806 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 TBXAS1P24557 533 aaPredicted RBP13.05□□□□□ -0.32
DNMT1-218ENST00000589294 BRCC3P46736 316 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 NOP14P78316 857 aaKnown RBP13.05□□□□□ -0.32
DNMT1-218ENST00000589294 KCNMA1Q12791 1236 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 GPM6BQ13491 265 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 SOWAHAQ2M3V2 549 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 PDE12Q6L8Q7 609 aaKnown RBP13.05□□□□□ -0.32
DNMT1-218ENST00000589294 GPR153Q6NV75 609 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 PDXDC1Q6P996 788 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 TRIM65Q6PJ69 517 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 ENOSF1Q7L5Y1 443 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 METTL23Q86XA0 190 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 TTC39CQ8N584 583 aa13.05□□□□□ -0.32
DNMT1-218ENST00000589294 HASPINQ8TF76 798 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms