RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TRMT1Q9NXH9 659 aaKnown RBP23.87■■□□□ 1.41
ATG4D-209ENST00000588857 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-209ENST00000588857 ADGRG1Q9Y653 693 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 C9IYK1 514 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 PTGESO14684 152 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 STAU1O95793 577 aaKnown RBP23.86■■□□□ 1.41
ATG4D-209ENST00000588857 EOMESO95936 686 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 ATF7P17544 494 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-209ENST00000588857 CYP2C18P33260 490 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 SPA17Q15506 151 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 PPP1R10Q96QC0 940 aaKnown RBP23.86■■□□□ 1.41
ATG4D-209ENST00000588857 GDF15Q99988 308 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 WNT8AQ9H1J5 351 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 VRTNQ9H8Y1 702 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 SPTLC3Q9NUV7 552 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 CYP26A1O43174 497 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 ZNF500O60304 480 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-209ENST00000588857 THP07101 528 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 ANXA13P27216 316 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 YWHAEP62258 255 aaKnown RBP23.86■■□□□ 1.41
ATG4D-209ENST00000588857 KRT83P78385 493 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 C9orf57Q5W0N0 161 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 ZNF571Q7Z3V5 609 aaPredicted RBP23.86■■□□□ 1.41
ATG4D-209ENST00000588857 LRRC52Q8N7C0 313 aa23.86■■□□□ 1.41
ATG4D-209ENST00000588857 ASPAP45381 313 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 FAM189BP81408 668 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 ASTE1Q2TB18 679 aaPredicted RBP23.85■■□□□ 1.41
ATG4D-209ENST00000588857 SCARA5Q6ZMJ2 495 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 ZNF598Q86UK7 904 aaKnown RBP23.85■■□□□ 1.41
ATG4D-209ENST00000588857 ACRBPQ8NEB7 543 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 GSTCDQ8NEC7 633 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 LINC01599Q8WXQ3 324 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 PRKAG2Q9UGJ0 569 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 POLIQ9UNA4 740 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 PCDHB4Q9Y5E5 795 aa23.85■■□□□ 1.41
ATG4D-209ENST00000588857 CXCL10P02778 98 aa23.84■■□□□ 1.41
ATG4D-209ENST00000588857 ACO1P21399 889 aaKnown RBP23.84■■□□□ 1.41
ATG4D-209ENST00000588857 CLCN1P35523 988 aa23.84■■□□□ 1.41
ATG4D-209ENST00000588857 MAGEA10P43363 369 aaPredicted RBP23.84■■□□□ 1.41
ATG4D-209ENST00000588857 BPIFB4P59827 614 aa23.84■■□□□ 1.41
ATG4D-209ENST00000588857 TNNC1P63316 161 aa23.84■■□□□ 1.41
ATG4D-209ENST00000588857 ZNF560Q96MR9 790 aa23.84■■□□□ 1.41
ATG4D-209ENST00000588857 ADAMTS1Q9UHI8 967 aa23.84■■□□□ 1.41
ATG4D-209ENST00000588857 RANBP2P49792 3224 aaKnown RBP23.83■■□□□ 1.41
ATG4D-209ENST00000588857 ANO9A1A5B4 782 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 USP27XA6NNY8 438 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 LCA5LO95447 670 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 BMP8BP34820 402 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 PNPLA4P41247 253 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 SCNN1GP51170 649 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 SOX4Q06945 474 aaPredicted RBP23.83■■□□□ 1.41
ATG4D-209ENST00000588857 SLC18A3Q16572 532 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 TMEM270Q6UE05 265 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 PPP1R13BQ96KQ4 1090 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 BCO2Q9BYV7 579 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 CISHQ9NSE2 258 aa23.83■■□□□ 1.41
ATG4D-209ENST00000588857 PIRO00625 290 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 ENPP3O14638 875 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 WEE2P0C1S8 567 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 CD58P19256 250 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 PDE6CP51160 858 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 CYP27A1Q02318 531 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 GFPT1Q06210 699 aaPredicted RBP23.82■■□□□ 1.4
ATG4D-209ENST00000588857 BMS1Q14692 1282 aaKnown RBP23.82■■□□□ 1.4
ATG4D-209ENST00000588857 SMYD5Q6GMV2 418 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 GLB1LQ6UWU2 654 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 DEFB128Q7Z7B8 93 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 AGPAT1Q99943 283 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 CYP3A43Q9HB55 503 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 GOLGA2P5Q9HBQ8 144 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 MIOSQ9NXC5 875 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 PCDH10Q9P2E7 1040 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 CNTN6Q9UQ52 1028 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 INPP5FQ9Y2H2 1132 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 GOLGA6L9A6NEM1 432 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 PPEF2O14830 753 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 TNFAIP3P21580 790 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 LRPAP1P30533 357 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 RFC2P35250 354 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 AFF1P51825 1210 aaKnown RBP23.82■■□□□ 1.4
ATG4D-209ENST00000588857 KIAA1328Q86T90 577 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 SLC47A2Q86VL8 602 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 RBBP8NLQ8NC74 664 aaPredicted RBP23.82■■□□□ 1.4
ATG4D-209ENST00000588857 MMS19Q96T76 1030 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 LUC7LQ9NQ29 371 aaKnown RBP23.82■■□□□ 1.4
ATG4D-209ENST00000588857 PRDM5Q9NQX1 630 aaPredicted RBP23.82■■□□□ 1.4
ATG4D-209ENST00000588857 TMEM161AQ9NX61 479 aa23.82■■□□□ 1.4
ATG4D-209ENST00000588857 A0A087X0T9 212 aa23.81■■□□□ 1.4
ATG4D-209ENST00000588857 TRIM43BA6NCK2 446 aa23.81■■□□□ 1.4
ATG4D-209ENST00000588857 FAM228BP0C875 321 aa23.81■■□□□ 1.4
ATG4D-209ENST00000588857 CYP11B1P15538 503 aa23.81■■□□□ 1.4
ATG4D-209ENST00000588857 UBR7Q8N806 425 aa23.81■■□□□ 1.4
ATG4D-209ENST00000588857 EPS8L1Q8TE68 723 aa23.81■■□□□ 1.4
ATG4D-209ENST00000588857 TRIM43Q96BQ3 446 aaPredicted RBP23.81■■□□□ 1.4
ATG4D-209ENST00000588857 ELAC1Q9H777 363 aaKnown RBP23.81■■□□□ 1.4
ATG4D-209ENST00000588857 SEPT11Q9NVA2 429 aaKnown RBP23.81■■□□□ 1.4
ATG4D-209ENST00000588857 REXO2Q9Y3B8 237 aaKnown RBP23.81■■□□□ 1.4
ATG4D-209ENST00000588857 MICAL3Q7RTP6 2002 aa23.8■■□□□ 1.4
ATG4D-209ENST00000588857 POMCP01189 267 aa23.8■■□□□ 1.4
ATG4D-209ENST00000588857 TAF6P49848 677 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms