RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 RIOX2Q8IUF8 465 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 RELL1Q8IUW5 271 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 TTC13Q8NBP0 860 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 DYDC1Q8WWB3 177 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 RAPGEF5Q92565 580 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 ANKRD36BP1Q96IX9 119 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 SEC16BQ96JE7 1060 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 CCDC114Q96M63 670 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 CFAP57Q96MR6 1250 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 POP1Q99575 1024 aaKnown RBP7.61□□□□□ -1.19
SPIDR-228ENST00000588781 KIFC3Q9BVG8 833 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 OSBPL8Q9BZF1 889 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 PHACTR1Q9C0D0 580 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 KDM4CQ9H3R0 1056 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 TOPORSQ9NS56 1045 aaPredicted RBP7.61□□□□□ -1.19
SPIDR-228ENST00000588781 WDR35Q9P2L0 1181 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 NR2E1Q9Y466 385 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 RIPK3Q9Y572 518 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 CSADQ9Y600 493 aa7.61□□□□□ -1.19
SPIDR-228ENST00000588781 MROH7Q68CQ1 1323 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 PARP14Q460N5 1801 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 GSTTP1A0A1W2PQM5 241 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 SPDYE16A6NNV3 312 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 NFKBIEO00221 500 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TRIM66O15016 1216 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TLR3O15455 904 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 ATMINO43313 823 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 MAFO75444 373 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TTC4O95801 387 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 KRT7P08729 469 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TMEM191BP0C7N4 346 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 P4HA1P13674 534 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 ACO1P21399 889 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 RRM1P23921 792 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 MARCKSL1P49006 195 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 LIG3P49916 1009 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 STAT5BP51692 787 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 NLRP11P59045 1033 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 NOMO3P69849 1222 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 SP4Q02446 784 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TNFAIP2Q03169 654 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 IFT88Q13099 833 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 MAPK6Q16659 721 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 HADHQ16836 314 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 SKIDA1Q1XH10 827 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 LACTB2Q53H82 288 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 ZFYVE27Q5T4F4 411 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TTC27Q6P3X3 843 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 DCUN1D2Q6PH85 259 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TMEM270Q6UE05 265 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 METTL7BQ6UX53 244 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 PPP1R21Q6ZMI0 780 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 ARHGEF18Q6ZSZ5 1173 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 GSTA5Q7RTV2 222 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TAS1R3Q7RTX0 852 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TRMT1LQ7Z2T5 733 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 APBB1IPQ7Z5R6 666 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 CCDC25Q86WR0 208 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 SUGP1Q8IWZ8 645 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 CNPY4Q8N129 248 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 GBP7Q8N8V2 638 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 ATXN2LQ8WWM7 1075 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 ZNF516Q92618 1163 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 RNF25Q96BH1 459 aaPredicted RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 GRAMD1AQ96CP6 724 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 DDX27Q96GQ7 796 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 NCAPGQ9BPX3 1015 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 SH2D3AQ9BRG2 576 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 TCHPQ9BT92 498 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 DNAI2Q9GZS0 605 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 NIF3L1Q9GZT8 377 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 UBN1Q9NPG3 1134 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 WBP1LQ9NX94 342 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 NKIRAS1Q9NYS0 192 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 SENP1Q9P0U3 644 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 DRG1Q9Y295 367 aaKnown RBP7.6□□□□□ -1.19
SPIDR-228ENST00000588781 EFR3BQ9Y2G0 817 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 PTPN22Q9Y2R2 807 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 AFG3L2Q9Y4W6 797 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 CAPN7Q9Y6W3 813 aa7.6□□□□□ -1.19
SPIDR-228ENST00000588781 ADGRA3Q8IWK6 1321 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 NOP56O00567 594 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 CDH16O75309 829 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 RGS20O76081 388 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ASS1P00966 412 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 PRKCBP05771 671 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 CHN1P15882 459 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 TSHRP16473 764 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 DRD4P21917 467 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 MMP8P22894 467 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 EIF4BP23588 611 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 EDNRBP24530 442 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 PHBP35232 272 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 IREB2P48200 963 aaKnown RBP7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ACOT2P49753 483 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 ZNF132P52740 706 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 LBX1P52954 281 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 SEC24CP53992 1094 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 SNX16P57768 344 aa7.59□□□□□ -1.19
SPIDR-228ENST00000588781 IRX3P78415 501 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms