RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZNF334Q9HCZ1 680 aaPredicted RBP20.11■□□□□ 0.81
CCDC43-204ENST00000588687 NCDNQ9UBB6 729 aa20.11■□□□□ 0.81
CCDC43-204ENST00000588687 ACACBO00763 2458 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 TTC26A0AVF1 554 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 FAM189A1O60320 539 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 OAZ2O95190 189 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 PLS3P13797 630 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 GJA1P17302 382 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 PSMC3P17980 439 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 LRPAP1P30533 357 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 VIPR2P41587 438 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
CCDC43-204ENST00000588687 APPL2Q8NEU8 664 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 SHKBP1Q8TBC3 707 aa20.1■□□□□ 0.81
CCDC43-204ENST00000588687 FAM126AQ9BYI3 521 aaPredicted RBP20.1■□□□□ 0.81
CCDC43-204ENST00000588687 NDRG2Q9UN36 371 aaKnown RBP20.1■□□□□ 0.81
CCDC43-204ENST00000588687 ANK1P16157 1881 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 MAN2B1O00754 1011 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 GDI1P31150 447 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 SLC12A3P55017 1021 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 ATP2C1P98194 919 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-204ENST00000588687 RAD51AP2Q09MP3 1159 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 TEAD2Q15562 447 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 WDR44Q5JSH3 913 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 CYP4A22Q5TCH4 519 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 FAM184AQ8NB25 1140 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 LEMD2Q8NC56 503 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 ZSCAN18Q8TBC5 510 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-204ENST00000588687 DEPDC1BQ8WUY9 529 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 IRF7Q92985 503 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 IER2Q9BTL4 223 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 MKNK1Q9BUB5 465 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 PARD6AQ9NPB6 346 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 ASAH2Q9NR71 780 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 SH2B1Q9NRF2 756 aaPredicted RBP20.09■□□□□ 0.81
CCDC43-204ENST00000588687 PIAS3Q9Y6X2 628 aa20.09■□□□□ 0.81
CCDC43-204ENST00000588687 OR4Q2P0C623 313 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 CPB1P15086 417 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 NCKAP1LP55160 1127 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 SPAG1Q07617 926 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 GAS6Q14393 721 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 IQCEQ6IPM2 695 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 DTHD1Q6ZMT9 781 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 SYT2Q8N9I0 419 aaPredicted RBP20.08■□□□□ 0.81
CCDC43-204ENST00000588687 ZSCAN31Q96LW9 406 aaPredicted RBP20.08■□□□□ 0.81
CCDC43-204ENST00000588687 ZNF512Q96ME7 567 aaPredicted RBP20.08■□□□□ 0.81
CCDC43-204ENST00000588687 PLEKHA5Q9HAU0 1116 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 PPP4R2Q9NY27 417 aa20.08■□□□□ 0.81
CCDC43-204ENST00000588687 CACNA1BQ00975 2339 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 CHRNB1P11230 501 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 MYL4P12829 197 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 TNFSF9P41273 254 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 YWHAHQ04917 246 aaPredicted RBP20.07■□□□□ 0.8
CCDC43-204ENST00000588687 FCHO2Q0JRZ9 810 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 STRN3Q13033 797 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 TMEM119Q4V9L6 283 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 MFSD6LQ8IWD5 586 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 ELMOD1Q8N336 334 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 LRRC15Q8TF66 581 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 FAM3CQ92520 227 aa20.07■□□□□ 0.8
CCDC43-204ENST00000588687 TIMM13Q9Y5L4 95 aaPredicted RBP20.07■□□□□ 0.8
CCDC43-204ENST00000588687 HEPACAM2A8MVW5 462 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 PPEF2O14830 753 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 CLDN3O15551 220 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 EIF5BO60841 1220 aaKnown RBP20.06■□□□□ 0.8
CCDC43-204ENST00000588687 ADRB2P07550 413 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 CLTAP09496 248 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 CYP3A5P20815 502 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 LAMA1P25391 3075 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 GUCY2FP51841 1108 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 MLLT6P55198 1093 aaPredicted RBP20.06■□□□□ 0.8
CCDC43-204ENST00000588687 ARSHQ5FYA8 562 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 STXBP5Q5T5C0 1151 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 TTC9BQ8N6N2 239 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 GPR161Q8N6U8 529 aaKnown RBP20.06■□□□□ 0.8
CCDC43-204ENST00000588687 PGLYRP2Q96PD5 576 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 KCND2Q9NZV8 630 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 CHD8Q9HCK8 2581 aa20.06■□□□□ 0.8
CCDC43-204ENST00000588687 NPHP3-ACAD11A0A0J9YXS1 232 aa20.05■□□□□ 0.8
CCDC43-204ENST00000588687 ATXN1P54253 815 aaKnown RBP20.05■□□□□ 0.8
CCDC43-204ENST00000588687 CACNB1Q02641 598 aaPredicted RBP20.05■□□□□ 0.8
CCDC43-204ENST00000588687 LMNB2Q03252 620 aa20.05■□□□□ 0.8
CCDC43-204ENST00000588687 GPR17Q13304 367 aa20.05■□□□□ 0.8
CCDC43-204ENST00000588687 ENOX2Q16206 610 aaKnown RBP20.05■□□□□ 0.8
CCDC43-204ENST00000588687 KCTD17Q8N5Z5 321 aa20.05■□□□□ 0.8
CCDC43-204ENST00000588687 KIF12Q96FN5 646 aa20.05■□□□□ 0.8
CCDC43-204ENST00000588687 LRRC3BQ96PB8 259 aa20.05■□□□□ 0.8
CCDC43-204ENST00000588687 OXCT2Q9BYC2 517 aaPredicted RBP20.05■□□□□ 0.8
CCDC43-204ENST00000588687 LMAN1LQ9HAT1 526 aa20.05■□□□□ 0.8
CCDC43-204ENST00000588687 UBQLN1Q9UMX0 589 aaKnown RBP20.05■□□□□ 0.8
CCDC43-204ENST00000588687 A0A1W2PRU2 124 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 MTMR11A4FU01 709 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 ZNF263O14978 683 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 PIGRP01833 764 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 PLA2G4BP0C869 781 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 CCR3P51677 355 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 SMTNP53814 917 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 SATB1Q01826 763 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 DUSP4Q13115 394 aa20.04■□□□□ 0.8
CCDC43-204ENST00000588687 CENPPQ6IPU0 288 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms