RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 LZTFL1Q9NQ48 299 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 SLC38A7Q9NVC3 462 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 NAGPAQ9UK23 515 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 CNTN6Q9UQ52 1028 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 REXO2Q9Y3B8 237 aaKnown RBP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 PCDHB4Q9Y5E5 795 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 ATP8B3O60423 1300 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 A0A0U1RQF3 1178 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 SMIM28A0A1B0GU29 152 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 DCDC2CA8MYV0 355 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 MYCP01106 439 aaPredicted RBP11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 ITGB3P05106 788 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 H2AFZP0C0S5 128 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 FAM163BP0C2L3 166 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 GZMAP12544 262 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 CYP11B1P15538 503 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 PAX3P23760 479 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 AKAP5P24588 427 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 PNPLA4P41247 253 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 PDE6CP51160 858 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 GNG11P61952 73 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 DSC3Q14574 896 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 IFI16Q16666 785 aaKnown RBP11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 WDR72Q3MJ13 1102 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 SPOPLQ6IQ16 392 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 H2AFVQ71UI9 128 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 FAM126BQ8IXS8 530 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 LRRC52Q8N7C0 313 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 SLC30A5Q8TAD4 765 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 U2AF1L4Q8WU68 220 aaKnown RBP11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF333Q96JL9 665 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 CALR3Q96L12 384 aaKnown RBP11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 TOX2Q96NM4 488 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 XYLT2Q9H1B5 865 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 NXF3Q9H4D5 531 aaKnown RBP11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 SIX4Q9UIU6 781 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 HES2Q9Y543 173 aa11.25□□□□□ -0.61
CHMP1B-202ENST00000588284 BTNL10A8MVZ5 291 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 DDX3XO00571 662 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF263O14978 683 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 MEFVO15553 781 aaPredicted RBP11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 EOMESO95936 686 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 PNMA6AP0CW24 399 aaPredicted RBP11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 COL6A1P12109 1028 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 ACO1P21399 889 aaKnown RBP11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 POLR2BP30876 1174 aaKnown RBP11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 ARHGAP25P42331 645 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 TNNC1P63316 161 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 CDR2Q01850 454 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 C1orf53Q5VUE5 145 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 TMEM270Q6UE05 265 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 TRIM72Q6ZMU5 477 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 LRRC8DQ7L1W4 858 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 ANKRD33Q7Z3H0 272 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 CXorf38Q8TB03 319 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 ABHD8Q96I13 439 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 FAM84AQ96KN4 292 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF560Q96MR9 790 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 ADAM2Q99965 735 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 SYT11Q9BT88 431 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 PDCL3Q9H2J4 239 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 KIAA1257Q9ULG3 409 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 GUCA1BQ9UMX6 200 aa11.24□□□□□ -0.61
CHMP1B-202ENST00000588284 RTN2O75298 545 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 TACC1O75410 805 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 THP07101 528 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 CASQ1P31415 396 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 GJA8P48165 433 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 LBX1P52954 281 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 FAM189BP81408 668 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 MLLT1Q03111 559 aaPredicted RBP11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 TUBB2AQ13885 445 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 TRAF7Q6Q0C0 670 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 GPIHBP1Q8IV16 184 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 GLYCTKQ8IVS8 523 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 UBR7Q8N806 425 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 RBBP8NLQ8NC74 664 aaPredicted RBP11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 EPS8L1Q8TE68 723 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 SEPT8Q92599 483 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF592Q92610 1267 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 APBB2Q92870 758 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 ZMAT2Q96NC0 199 aaKnown RBP11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 TUBB2BQ9BVA1 445 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 RGS18Q9NS28 235 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 CISHQ9NSE2 258 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 SEPT11Q9NVA2 429 aaKnown RBP11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 KLK14Q9P0G3 267 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 DNAI1Q9UI46 699 aa11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 NOCTQ9UK39 431 aaKnown RBP11.23□□□□□ -0.61
CHMP1B-202ENST00000588284 ANO9A1A5B4 782 aa11.22□□□□□ -0.61
CHMP1B-202ENST00000588284 ANKRD62A6NC57 917 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms