RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 KPNA7A9QM74 516 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 F8W810 466 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 ITGB1P05556 798 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 CA3P07451 260 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 SLC9A1P19634 815 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 PBX1P40424 430 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 PBX3P40426 434 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 SMAD3P84022 425 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 PLCB2Q00722 1185 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 SYCP1Q15431 976 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 ZNF667Q5HYK9 610 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 DPY19L2P1Q6NXN4 242 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 TMEM173Q86WV6 379 aaPredicted RBP18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 IGSF21Q96ID5 467 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 SAMD11Q96NU1 681 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 NT5C1BQ96P26 610 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 PI4K2AQ9BTU6 479 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 TRIM5Q9C035 493 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 APOBEC3GQ9HC16 384 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 PLCB1Q9NQ66 1216 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 MSRAQ9UJ68 235 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 NUB1Q9Y5A7 615 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 PCDHB12Q9Y5F1 795 aa18.23■□□□□ 0.51
PRKCSH-203ENST00000586486 EFEMP2O95967 443 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 IGFBP6P24592 240 aaPredicted RBP18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 PBX2P40425 430 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 WDR72Q3MJ13 1102 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 BCL7CQ8WUZ0 217 aaPredicted RBP18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 SUSD3Q96L08 255 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 PLVAPQ9BX97 442 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 NIF3L1Q9GZT8 377 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 SIX2Q9NPC8 291 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 SPG21Q9NZD8 308 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 APEX2Q9UBZ4 518 aa18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 SF3B1O75533 1304 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRKCSH-203ENST00000586486 LAMA3Q16787 3333 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 NT5C1B-RDH14C9J2C7 533 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 C5orf67F2Z3F1 127 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 M0QZQ0 153 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 TRAPPC3O43617 180 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 TADA2AO75478 443 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 ARHGEF15O94989 841 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 P4HA1P13674 534 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 BMPR1AP36894 532 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 ELAVL2Q12926 359 aaKnown RBP18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 LRIT3Q3SXY7 679 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 SPOPLQ6IQ16 392 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 LIMS2Q7Z4I7 341 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 HASPINQ8TF76 798 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 MRFAP1L1Q96HT8 127 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 FAM81BQ96LP2 452 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 STK39Q9UEW8 545 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 DAAM1Q9Y4D1 1078 aa18.21■□□□□ 0.51
PRKCSH-203ENST00000586486 ITIH6Q6UXX5 1313 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 ARHGEF37A1IGU5 675 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 RFX1P22670 979 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 ASPAP45381 313 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 ZNF75DP51815 510 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 TNNC1P63316 161 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 GCNT1Q02742 428 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 TAP1Q03518 808 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 TIGD5Q53EQ6 642 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 FUT10Q6P4F1 479 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 RNF168Q8IYW5 571 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 TMEM169Q96HH4 297 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 SENP8Q96LD8 212 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 TGS1Q96RS0 853 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 LSM14BQ9BX40 385 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 BCO2Q9BYV7 579 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 FAM124BQ9H5Z6 455 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 COLQQ9Y215 455 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 SNX9Q9Y5X1 595 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 PLXNA4Q9HCM2 1894 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 RB1P06400 928 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 TBXAS1P24557 533 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 DNAJB2P25686 324 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 CTNNB1P35222 781 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 BRCC3P46736 316 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 KLK7P49862 253 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 MRE11P49959 708 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 ERVK-21P61565 698 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 PLCB3Q01970 1234 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 KLHDC7AQ5VTJ3 777 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 SMYD5Q6GMV2 418 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 PHLDB3Q6NSJ2 640 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 DPH6Q7L8W6 267 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 TOP6BLQ8N6T0 577 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 SPATA18Q8TC71 538 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 TATDN2Q93075 761 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 NXF1Q9UBU9 619 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 FBXL5Q9UKA1 691 aa18.2■□□□□ 0.5
PRKCSH-203ENST00000586486 VWA8A3KMH1 1905 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 FGF18O76093 207 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 CLSTN1O94985 981 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 FAM163BP0C2L3 166 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 ODC1P11926 461 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 LRMPQ12912 555 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 CUL2Q13617 745 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 DSTYKQ6XUX3 929 aa18.19■□□□□ 0.5
PRKCSH-203ENST00000586486 ENOSF1Q7L5Y1 443 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms