RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 MACROD2A1Z1Q3 448 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 CTAGE9A4FU28 777 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 RBAK-RBAKDNI3L0D1 243 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 HOXA2O43364 376 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 THAP12O43422 761 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 LCA5LO95447 670 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 H2AFZP0C0S5 128 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 CKBP12277 381 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 CD58P19256 250 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 CYP3A5P20815 502 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 IBSPP21815 317 aaPredicted RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 POLR2BP30876 1174 aaKnown RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 CD52P31358 61 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 NSFP46459 744 aaKnown RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 TAF6P49848 677 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 SNX16P57768 344 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 MYL6P60660 151 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 ETF1P62495 437 aaKnown RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 APBA1Q02410 837 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 MGAT3Q09327 533 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 STILQ15468 1287 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 NAB2Q15742 525 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 WDR72Q3MJ13 1102 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 FAM26DQ5JW98 314 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 C1orf220Q5T0J3 134 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 ALKBH5Q6P6C2 394 aaKnown RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 TMEM270Q6UE05 265 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 H2AFVQ71UI9 128 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 RHOT2Q8IXI1 618 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 EFCAB13Q8IY85 973 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 ABI1Q8IZP0 508 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 SYCE1Q8N0S2 351 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 LRRC52Q8N7C0 313 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 RBBP8NLQ8NC74 664 aaPredicted RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 RNF169Q8NCN4 708 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 OR5B17Q8NGF7 314 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 LMO3Q8TAP4 145 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 U2AF1L4Q8WU68 220 aaKnown RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 RSPH1Q8WYR4 309 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 SEPT8Q92599 483 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 SEMA4DQ92854 862 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 HPDLQ96IR7 371 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 FAM193BQ96PV7 902 aaPredicted RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 MMS19Q96T76 1030 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 AGPAT1Q99943 283 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 EIF2AQ9BY44 585 aaKnown RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 RSAD1Q9HA92 442 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 CYP3A43Q9HB55 503 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 PLA2G2EQ9NZK7 142 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 NXF1Q9UBU9 619 aaKnown RBP6.62□□□□□ -1.35
LIG3-206ENST00000586058 ADAMTS1Q9UHI8 967 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 DNAI1Q9UI46 699 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 OGDHLQ9ULD0 1010 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 LRFN2Q9ULH4 789 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 PADI3Q9ULW8 664 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 AGAP1Q9UPQ3 857 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 GIT1Q9Y2X7 761 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 PTPRDP23468 1912 aa6.62□□□□□ -1.35
LIG3-206ENST00000586058 ALPK3Q96L96 1907 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 ANO9A1A5B4 782 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 ANKRD62A6NC57 917 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 USP27XA6NNY8 438 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 RNF225M0QZC1 329 aaPredicted RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 FOXN3O00409 490 aaPredicted RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 CYP26A1O43174 497 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 PQBP1O60828 265 aaKnown RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 HUS1O60921 280 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 RTN2O75298 545 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 VNN1O95497 513 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 STAU1O95793 577 aaKnown RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 CHRNA1P02708 482 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 THP07101 528 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 PLEKP08567 350 aaPredicted RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 PNMA6AP0CW24 399 aaPredicted RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 MYBL1P10243 752 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 CD19P15391 556 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 CYP11B1P15538 503 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 PAX3P23760 479 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 AKAP5P24588 427 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 MLH1P40692 756 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 NOP2P46087 812 aaKnown RBP6.61□□□□□ -1.35
LIG3-206ENST00000586058 SLC8A3P57103 927 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 CAP1Q01518 475 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 CDR2Q01850 454 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 CYP27A1Q02318 531 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 GRIK3Q13003 919 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 TUBB2AQ13885 445 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 HIC1Q14526 733 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 SLC10A6Q3KNW5 377 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 GLRA4Q5JXX5 417 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 ZNF569Q5MCW4 686 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 PPP1R15BQ5SWA1 713 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 ZNF618Q5T7W0 954 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 LIN9Q5TKA1 542 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 TAF3Q5VWG9 929 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 HGSNATQ68CP4 663 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 GLB1LQ6UWU2 654 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 SYT10Q6XYQ8 523 aa6.61□□□□□ -1.35
LIG3-206ENST00000586058 ZNF662Q6ZS27 426 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms