RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 ASPAP45381 313 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 ZNF132P52740 706 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 HNRNPH2P55795 449 aaKnown RBP16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 ITIH3Q06033 890 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 GNASQ5JWF2 1037 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 CATSPER4Q7RTX7 472 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 TAF4BQ92750 862 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 KATNAL1Q9BW62 490 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 CXCL16Q9H2A7 254 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 CISHQ9NSE2 258 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 RNF14Q9UBS8 474 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 AMFRQ9UKV5 643 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 RAB21Q9UL25 225 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 MROH7Q68CQ1 1323 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 C17orf102A2RUQ5 167 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 PGK1P00558 417 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 ITGB3P05106 788 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 CYP1A2P05177 515 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 EIF4BP23588 611 aaKnown RBP16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 GJA9P57773 515 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 KYAT1Q16773 422 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 ZNF394Q53GI3 561 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 MFSD14CQ5VZR4 134 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 SCARA5Q6ZMJ2 495 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 C7orf31Q8N865 590 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 ZNF653Q96CK0 615 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 EIF2AQ9BY44 585 aaKnown RBP16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 NXF1Q9UBU9 619 aaKnown RBP16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 GTF3C4Q9UKN8 822 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 POLIQ9UNA4 740 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 ALG6Q9Y672 507 aa16.15■□□□□ 0.18
LDLRAD4-205ENST00000585931 NPTXRO95502 500 aa16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 HOXC8P31273 242 aa16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 NOGQ13253 232 aa16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 C2CD6Q53TS8 623 aa16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 TMCO3Q6UWJ1 677 aa16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 PASD1Q8IV76 773 aa16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 ZNF606Q8WXB4 792 aa16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 NUP85Q9BW27 656 aa16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 RBM12Q9NTZ6 932 aaKnown RBP16.14■□□□□ 0.17
LDLRAD4-205ENST00000585931 CES2O00748 559 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 THAP12O43422 761 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 MTA2O94776 668 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 SEC31AO94979 1220 aaKnown RBP16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 GRM5P41594 1212 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 GUCY2FP51841 1108 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 VSNL1P62760 191 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 WDR72Q3MJ13 1102 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 NAA35Q5VZE5 725 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 SLC27A1Q6PCB7 646 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 MCOLN2Q8IZK6 566 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 MMGT1Q8N4V1 131 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 PBKQ96KB5 322 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 BTBD6Q96KE9 485 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 SNTG2Q9NY99 539 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 CNOT8Q9UFF9 292 aaKnown RBP16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 DDX3YO15523 660 aaKnown RBP16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 CENPCQ03188 943 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 CACNB2Q08289 660 aaPredicted RBP16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 TMEM132DQ14C87 1099 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 SNX17Q15036 470 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 DCAF4L1Q3SXM0 396 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 CC2D1AQ6P1N0 951 aaPredicted RBP16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 CXCL17Q6UXB2 119 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 ZNF564Q8TBZ8 553 aaPredicted RBP16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 HES2Q9Y543 173 aa16.13■□□□□ 0.17
LDLRAD4-205ENST00000585931 CCDC151A5D8V7 595 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 CEP104O60308 925 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 TOMM70O94826 608 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 RAP1GAPP47736 663 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 CDH8P55286 799 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 MRPS25P82663 173 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 MESDQ14696 234 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 NOTUMQ6P988 496 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 PHLDB2Q86SQ0 1253 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 LRRC1Q9BTT6 524 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 RNF186Q9NXI6 227 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 C2CD2Q9Y426 696 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 SEPT4O43236 478 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 GNAT1P11488 350 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 POLR2BP30876 1174 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 NSFP46459 744 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 NOMO3P69849 1222 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 PCBP1Q15365 356 aaKnown RBP eCLIP16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 DEFB115Q30KQ5 88 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 ZNF667Q5HYK9 610 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 C11orf63Q6NUN7 778 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 LLGL2Q6P1M3 1020 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 USP38Q8NB14 1042 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 RNF217Q8TC41 542 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 HDAC7Q8WUI4 952 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 CALR3Q96L12 384 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 ZMAT2Q96NC0 199 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 HINFPQ9BQA5 517 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 BCO2Q9BYV7 579 aa16.12■□□□□ 0.17
LDLRAD4-205ENST00000585931 SCN10AQ9Y5Y9 1956 aa16.11■□□□□ 0.17
LDLRAD4-205ENST00000585931 TMEM110-MUSTN1A8MSY1 372 aa16.11■□□□□ 0.17
LDLRAD4-205ENST00000585931 RRM1P23921 792 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms