RNA–Protein interactions for RNA: ENST00000585855.2

TCF3-206, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,170 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-206ENST00000585855 SCARA3Q6AZY7 606 aa21.41■■□□□ 1.02
TCF3-206ENST00000585855 TRIM65Q6PJ69 517 aa21.41■■□□□ 1.02
TCF3-206ENST00000585855 LMO3Q8TAP4 145 aa21.41■■□□□ 1.02
TCF3-206ENST00000585855 TMEM169Q96HH4 297 aa21.41■■□□□ 1.02
TCF3-206ENST00000585855 IGSF21Q96ID5 467 aa21.41■■□□□ 1.02
TCF3-206ENST00000585855 NT5C1BQ96P26 610 aa21.41■■□□□ 1.02
TCF3-206ENST00000585855 PLVAPQ9BX97 442 aa21.41■■□□□ 1.02
TCF3-206ENST00000585855 MARCH5Q9NX47 278 aa21.41■■□□□ 1.02
TCF3-206ENST00000585855 COLQQ9Y215 455 aaPredicted RBP21.41■■□□□ 1.02
TCF3-206ENST00000585855 A0A1W2PQC6 194 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 FSD2A1L4K1 749 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 F8W810 466 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 SPTLC1O15269 473 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 TEX33O43247 280 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 ITGB1P05556 798 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 PON1P27169 355 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 BMPR1AP36894 532 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 AARSP49588 968 aaKnown RBP eCLIP21.4■■□□□ 1.02
TCF3-206ENST00000585855 TNNC1P63316 161 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 WDR72Q3MJ13 1102 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 DSTYKQ6XUX3 929 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 PCMTD1Q96MG8 357 aaPredicted RBP21.4■■□□□ 1.02
TCF3-206ENST00000585855 TGS1Q96RS0 853 aaKnown RBP21.4■■□□□ 1.02
TCF3-206ENST00000585855 NIF3L1Q9GZT8 377 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 NKX2-4Q9H2Z4 354 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 GDAP2Q9NXN4 497 aa21.4■■□□□ 1.02
TCF3-206ENST00000585855 SLC9A1P19634 815 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 DNAJB2P25686 324 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 TAP1Q03518 808 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 KCNMA1Q12791 1236 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 LRIT3Q3SXY7 679 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 TIGD5Q53EQ6 642 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 PPP2R2DQ66LE6 453 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 FUT10Q6P4F1 479 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 CD300LGQ6UXG3 332 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 TMEM173Q86WV6 379 aaPredicted RBP21.39■■□□□ 1.01
TCF3-206ENST00000585855 FAXDC2Q96IV6 333 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 SUSD3Q96L08 255 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 SENP8Q96LD8 212 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 LSM14BQ9BX40 385 aaKnown RBP21.39■■□□□ 1.01
TCF3-206ENST00000585855 SLC28A3Q9HAS3 691 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 GRPEL1Q9HAV7 217 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.39■■□□□ 1.014e-6■■■■■ 54.5
TCF3-206ENST00000585855 NXF1Q9UBU9 619 aaKnown RBP21.39■■□□□ 1.01
TCF3-206ENST00000585855 STK39Q9UEW8 545 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 SNX9Q9Y5X1 595 aa21.39■■□□□ 1.01
TCF3-206ENST00000585855 HUS1O60921 280 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 LRRN2O75325 713 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 FGF18O76093 207 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 ARHGEF15O94989 841 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 RB1P06400 928 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 ODC1P11926 461 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 IGFBP6P24592 240 aaPredicted RBP21.38■■□□□ 1.01
TCF3-206ENST00000585855 BRCC3P46736 316 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 ERVK-21P61565 698 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 KRT17Q04695 432 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 LRMPQ12912 555 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 GSE1Q14687 1217 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 SPOPLQ6IQ16 392 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 BCL7CQ8WUZ0 217 aaPredicted RBP21.38■■□□□ 1.01
TCF3-206ENST00000585855 TIFAQ96CG3 184 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 FAM81BQ96LP2 452 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 C17orf80Q9BSJ5 609 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 PLCB1Q9NQ66 1216 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 SIK3Q9Y2K2 1263 aa21.38■■□□□ 1.01
TCF3-206ENST00000585855 C5orf67F2Z3F1 127 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 M0QZQ0 153 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 CYB561D2O14569 222 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 AP5Z1O43299 807 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 TBXAS1P24557 533 aaPredicted RBP21.37■■□□□ 1.01
TCF3-206ENST00000585855 TOP6BLQ8N6T0 577 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 NEK11Q8NG66 645 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 MMS19Q96T76 1030 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 C11orf84Q9BUA3 381 aaPredicted RBP21.37■■□□□ 1.01
TCF3-206ENST00000585855 APOBEC3GQ9HC16 384 aaKnown RBP21.37■■□□□ 1.01
TCF3-206ENST00000585855 APEX2Q9UBZ4 518 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 DSEQ9UL01 958 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 PCDHB8Q9UN66 801 aa21.37■■□□□ 1.01
TCF3-206ENST00000585855 TRIOBPQ9H2D6 2365 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 I3L4J1 428 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 SYN3O14994 580 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 RFX1P22670 979 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 ZNF75DP51815 510 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 PLCB3Q01970 1234 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 GCNT1Q02742 428 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.36■■□□□ 1.01
TCF3-206ENST00000585855 DPH6Q7L8W6 267 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 DDX53Q86TM3 631 aaKnown RBP21.36■■□□□ 1.01
TCF3-206ENST00000585855 PPM1KQ8N3J5 372 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 KLHL23Q8NBE8 558 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 APPL2Q8NEU8 664 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 TATDN2Q93075 761 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 ELMO3Q96BJ8 720 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 CYP3A43Q9HB55 503 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 SIX2Q9NPC8 291 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 FAM207AQ9NSI2 230 aaPredicted RBP21.36■■□□□ 1.01
TCF3-206ENST00000585855 PUF60Q9UHX1 559 aaKnown RBP21.36■■□□□ 1.01
TCF3-206ENST00000585855 MTUS1Q9ULD2 1270 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 POLIQ9UNA4 740 aa21.36■■□□□ 1.01
TCF3-206ENST00000585855 DAAM1Q9Y4D1 1078 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms