RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 GSTCDQ8NEC7 633 aa18.19■□□□□ 0.5
HMG20B-215ENST00000585741 TAF4BQ92750 862 aa18.19■□□□□ 0.5
HMG20B-215ENST00000585741 IQCDQ96DY2 449 aa18.19■□□□□ 0.5
HMG20B-215ENST00000585741 NUP58Q9BVL2 599 aa18.19■□□□□ 0.5
HMG20B-215ENST00000585741 GOLGA2P5Q9HBQ8 144 aa18.19■□□□□ 0.5
HMG20B-215ENST00000585741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.19■□□□□ 0.52e-6■■□□□ 14
HMG20B-215ENST00000585741 FAM207AQ9NSI2 230 aaPredicted RBP18.19■□□□□ 0.5
HMG20B-215ENST00000585741 PLAGL2Q9UPG8 496 aa18.19■□□□□ 0.5
HMG20B-215ENST00000585741 COQ4Q9Y3A0 265 aa18.19■□□□□ 0.5
HMG20B-215ENST00000585741 NUB1Q9Y5A7 615 aa18.19■□□□□ 0.5
HMG20B-215ENST00000585741 TCF20Q9UGU0 1960 aaKnown RBP18.19■□□□□ 0.5
HMG20B-215ENST00000585741 RALGAPA2Q2PPJ7 1873 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 PODXLO00592 558 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 SLC9A1P19634 815 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 PON1P27169 355 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 CDC25BP30305 580 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 TAF6P49848 677 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 AFF1P51825 1210 aaKnown RBP18.18■□□□□ 0.5
HMG20B-215ENST00000585741 TNNC1P63316 161 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 TRIM14Q14142 442 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 PTPN21Q16825 1174 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 SV2CQ496J9 727 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 ZNF667Q5HYK9 610 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 C9orf57Q5W0N0 161 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 TRIM65Q6PJ69 517 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 LRRC52Q8N7C0 313 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 HPDLQ96IR7 371 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 FAM81BQ96LP2 452 aa18.18■□□□□ 0.5
HMG20B-215ENST00000585741 TTC3P53804 2025 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 CARNS1A5YM72 827 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 VNN1O95497 513 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 CST3P01034 146 aaPredicted RBP18.17■□□□□ 0.5
HMG20B-215ENST00000585741 ALDH2P05091 517 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 LRPAP1P30533 357 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 NOP14P78316 857 aaKnown RBP18.17■□□□□ 0.5
HMG20B-215ENST00000585741 SOX4Q06945 474 aaPredicted RBP18.17■□□□□ 0.5
HMG20B-215ENST00000585741 KCNMA1Q12791 1236 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 TMCO2Q7Z6W1 182 aaPredicted RBP18.17■□□□□ 0.5
HMG20B-215ENST00000585741 CMTR2Q8IYT2 770 aaKnown RBP18.17■□□□□ 0.5
HMG20B-215ENST00000585741 PPM1KQ8N3J5 372 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
HMG20B-215ENST00000585741 SEMA4DQ92854 862 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 PI4K2AQ9BTU6 479 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 PLCB1Q9NQ66 1216 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 SIX4Q9UIU6 781 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 DAAM1Q9Y4D1 1078 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 INSL6Q9Y581 213 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 ITIH6Q6UXX5 1313 aa18.17■□□□□ 0.5
HMG20B-215ENST00000585741 LCHNA4D1U4 455 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 TLL1O43897 1013 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 GJB5O95377 273 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 RFX1P22670 979 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 PAX3P23760 479 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 ALDH7A1P49419 539 aaKnown RBP18.16■□□□□ 0.5
HMG20B-215ENST00000585741 KLK7P49862 253 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 CLCNKBP51801 687 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 MFAP3P55082 362 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 WDR72Q3MJ13 1102 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 DCLRE1AQ6PJP8 1040 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 ZNF280BQ86YH2 543 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 FIBCD1Q8N539 461 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 SPC24Q8NBT2 197 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 ARNTL2Q8WYA1 636 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 SPAG5Q96R06 1193 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 MMS19Q96T76 1030 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 TMEM175Q9BSA9 504 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 COLEC11Q9BWP8 271 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 AAASQ9NRG9 546 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 NXF1Q9UBU9 619 aaKnown RBP18.16■□□□□ 0.5
HMG20B-215ENST00000585741 APEX2Q9UBZ4 518 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 SIK3Q9Y2K2 1263 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 FAN1Q9Y2M0 1017 aa18.16■□□□□ 0.5
HMG20B-215ENST00000585741 ANO9A1A5B4 782 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 ARHGEF37A1IGU5 675 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 PIRO00625 290 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 B3GAT3O94766 335 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 DDHD2O94830 711 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 ASS1P00966 412 aaKnown RBP18.15■□□□□ 0.5
HMG20B-215ENST00000585741 TBXAS1P24557 533 aaPredicted RBP18.15■□□□□ 0.5
HMG20B-215ENST00000585741 YWHAEP62258 255 aaKnown RBP18.15■□□□□ 0.5
HMG20B-215ENST00000585741 RAPGEF1Q13905 1077 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 NAB2Q15742 525 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 TSR1Q2NL82 804 aaKnown RBP18.15■□□□□ 0.5
HMG20B-215ENST00000585741 KLHDC7AQ5VTJ3 777 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 DSTYKQ6XUX3 929 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 COLGALT2Q8IYK4 626 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 CPLX3Q8WVH0 158 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 RAD9AQ99638 391 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 NRDE2Q9H7Z3 1164 aa18.15■□□□□ 0.5
HMG20B-215ENST00000585741 UBE2TQ9NPD8 197 aaPredicted RBP18.15■□□□□ 0.5
HMG20B-215ENST00000585741 PRG3Q9Y2Y8 225 aaPredicted RBP18.15■□□□□ 0.5
HMG20B-215ENST00000585741 ANK1P16157 1881 aa18.14■□□□□ 0.49
HMG20B-215ENST00000585741 KPNA7A9QM74 516 aa18.14■□□□□ 0.49
HMG20B-215ENST00000585741 TRAPPC3O43617 180 aa18.14■□□□□ 0.49
HMG20B-215ENST00000585741 HUS1O60921 280 aa18.14■□□□□ 0.49
HMG20B-215ENST00000585741 TADA2AO75478 443 aa18.14■□□□□ 0.49
HMG20B-215ENST00000585741 STAU1O95793 577 aaKnown RBP18.14■□□□□ 0.49
HMG20B-215ENST00000585741 LAG3P18627 525 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms