RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 DSEQ9UL01 958 aa15.7■□□□□ 0.1
SCAMP4-209ENST00000585335 KPNA7A9QM74 516 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 F8W810 466 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 PPEF2O14830 753 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 SYN3O14994 580 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 HUS1O60921 280 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 HLA-DRAP01903 254 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 FMO5P49326 533 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 GLUD2P49448 558 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 TNNC1P63316 161 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 CREMQ03060 361 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 KCNH2Q12809 1159 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 SMC1AQ14683 1233 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 ZNF699Q32M78 642 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 WDR44Q5JSH3 913 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 FAM171A1Q5VUB5 890 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 C15orf39Q6ZRI6 1047 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 METTL23Q86XA0 190 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 DHX40Q8IX18 779 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 FBXL13Q8NEE6 735 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 PPP2R3CQ969Q6 453 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 FAM84AQ96KN4 292 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 TTPALQ9BTX7 342 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 PRDM12Q9H4Q4 367 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 MRPL17Q9NRX2 175 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 PCDHB8Q9UN66 801 aa15.69■□□□□ 0.1
SCAMP4-209ENST00000585335 GRM6O15303 877 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 PMM2O15305 246 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 STAU1O95793 577 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 BRCC3P46736 316 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 AARSP49588 968 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 FXR1P51114 621 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 MYL6P60660 151 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 GRIN2CQ14957 1233 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 NCAPHQ15003 741 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 IQCB1Q15051 598 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 TIGD5Q53EQ6 642 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 ZNF667Q5HYK9 610 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 CEP57Q86XR8 500 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 GPR65Q8IYL9 337 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 DEFB123Q8N688 67 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 MRPL38Q96DV4 380 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 SENP8Q96LD8 212 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 FAM161BQ96MY7 647 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 TCF25Q9BQ70 676 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 GPR62Q9BZJ7 368 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 ZBP1Q9H171 429 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 RAB20Q9NX57 234 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 LMCD1Q9NZU5 365 aa15.68■□□□□ 0.1
SCAMP4-209ENST00000585335 EPOPA6NHQ4 379 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 H7C4K7 107 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 I3L4J1 428 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 M0QZQ0 153 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 CYB561D2O14569 222 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 VNN1O95497 513 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 CST3P01034 146 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 CTSAP10619 480 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 FGFR3P22607 806 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 DSG1Q02413 1049 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 WDR72Q3MJ13 1102 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 CBWD6Q4V339 395 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 VWA3BQ502W6 1294 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 CBWD3Q5JTY5 395 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 CBWD5Q5RIA9 395 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 CD300LGQ6UXG3 332 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 ANKS3Q6ZW76 656 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 LUZP1Q86V48 1076 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 RNF168Q8IYW5 571 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 TMEM130Q8N3G9 435 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 CXorf38Q8TB03 319 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 TAS1R2Q8TE23 839 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 RIN2Q8WYP3 895 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 VRTNQ9H8Y1 702 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 GDAP2Q9NXN4 497 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 TAB2Q9NYJ8 693 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 SNX9Q9Y5X1 595 aa15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 COL4A4P53420 1690 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-209ENST00000585335 LAMA2P24043 3122 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 PLXNA4Q9HCM2 1894 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 RFXAPO00287 272 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 SPTLC1O15269 473 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 CSPG5O95196 566 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 CXCL14O95715 111 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 EFEMP2O95967 443 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 ZNF18P17022 549 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 TYMPP19971 482 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 TKTP29401 623 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 YWHAHQ04917 246 aaPredicted RBP15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 KRT31Q15323 416 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 FILIP1LQ4L180 1135 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 FKBP15Q5T1M5 1219 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 PLPP4Q5VZY2 271 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 ZNF280DQ6N043 979 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 GBP6Q6ZN66 633 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 TMEM86AQ8N2M4 240 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 TOP6BLQ8N6T0 577 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 SPATA18Q8TC71 538 aa15.66■□□□□ 0.1
SCAMP4-209ENST00000585335 MMS19Q96T76 1030 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms