RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 STK39Q9UEW8 545 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 ADAM28Q9UKQ2 775 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 TRIOBPQ9H2D6 2365 aa12.53□□□□□ -0.4
CDRT1-207ENST00000583965 ATG2AQ2TAZ0 1938 aa12.52□□□□□ -0.4
CDRT1-207ENST00000583965 LINC01553A4QN01 128 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 GRXCR1A8MXD5 290 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 KPNA7A9QM74 516 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 PPEF2O14830 753 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 KIF4AO95239 1232 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 LINC00271P0C7V0 271 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 RFX1P22670 979 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 TNNC1P63316 161 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 SMAD3P84022 425 aaKnown RBP12.52□□□□□ -0.41
CDRT1-207ENST00000583965 KCNMA1Q12791 1236 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 SYCP1Q15431 976 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 ZNF667Q5HYK9 610 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 PRPF38BQ5VTL8 546 aaKnown RBP12.52□□□□□ -0.41
CDRT1-207ENST00000583965 SLC39A11Q8N1S5 342 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 TMEM130Q8N3G9 435 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 C3orf58Q8NDZ4 430 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 IGSF21Q96ID5 467 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 NT5C1BQ96P26 610 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 PLVAPQ9BX97 442 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 FAM124BQ9H5Z6 455 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-207ENST00000583965 APEX2Q9UBZ4 518 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 SIK3Q9Y2K2 1263 aa12.52□□□□□ -0.41
CDRT1-207ENST00000583965 PRG3Q9Y2Y8 225 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-207ENST00000583965 PTPRDP23468 1912 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 MTCL1Q9Y4B5 1905 aaKnown RBP12.51□□□□□ -0.41
CDRT1-207ENST00000583965 LCHNA4D1U4 455 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 M0QZQ0 153 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 AP5Z1O43299 807 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 TADA2AO75478 443 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 CLSTN1O94985 981 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 RB1P06400 928 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 CA3P07451 260 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 FAM163BP0C2L3 166 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 SLC9A1P19634 815 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 TBXAS1P24557 533 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-207ENST00000583965 BMPR1AP36894 532 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 PBX1P40424 430 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 WDR72Q3MJ13 1102 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 SCARA3Q6AZY7 606 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 CD300LGQ6UXG3 332 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 ENOSF1Q7L5Y1 443 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-207ENST00000583965 TOP6BLQ8N6T0 577 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 IQCDQ96DY2 449 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 TMEM169Q96HH4 297 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 MRFAP1L1Q96HT8 127 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 SUSD3Q96L08 255 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 SENP8Q96LD8 212 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 PCMTD1Q96MG8 357 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-207ENST00000583965 TGS1Q96RS0 853 aaKnown RBP12.51□□□□□ -0.41
CDRT1-207ENST00000583965 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 LSM14BQ9BX40 385 aaKnown RBP12.51□□□□□ -0.41
CDRT1-207ENST00000583965 PBX4Q9BYU1 374 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 NIF3L1Q9GZT8 377 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 MARCH5Q9NX47 278 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 FBXL5Q9UKA1 691 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 SF3B1O75533 1304 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDRT1-207ENST00000583965 ITIH6Q6UXX5 1313 aa12.51□□□□□ -0.41
CDRT1-207ENST00000583965 LAMA3Q16787 3333 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 NT5C1B-RDH14C9J2C7 533 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 C5orf67F2Z3F1 127 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 CYB561D2O14569 222 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 SYN3O14994 580 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 SPTLC1O15269 473 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 ADCY5O95622 1261 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 ITGB1P05556 798 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 ODC1P11926 461 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 MYOGP15173 224 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 CDC25BP30305 580 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 CTNNB1P35222 781 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 PBX3P40426 434 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 ZNF75DP51815 510 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 ERVK-21P61565 698 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 YWHAEP62258 255 aaKnown RBP12.5□□□□□ -0.41
CDRT1-207ENST00000583965 PLCB3Q01970 1234 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 GCNT1Q02742 428 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 KRT17Q04695 432 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 LRIT3Q3SXY7 679 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 TIGD5Q53EQ6 642 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 KLHDC7AQ5VTJ3 777 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 SPOPLQ6IQ16 392 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 DSTYKQ6XUX3 929 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 LIMS2Q7Z4I7 341 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 TTC39CQ8N584 583 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 APPL2Q8NEU8 664 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 NEK11Q8NG66 645 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 HASPINQ8TF76 798 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 RABGGTAQ92696 567 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
CDRT1-207ENST00000583965 NUP58Q9BVL2 599 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms