RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 CNTN3Q9P232 1028 aa22.34■■□□□ 1.17
SRSF1-206ENST00000583741 ARHGAP28Q9P2N2 729 aa22.34■■□□□ 1.17
SRSF1-206ENST00000583741 MORC2Q9Y6X9 1032 aaPredicted RBP22.34■■□□□ 1.17
SRSF1-206ENST00000583741 NCANO14594 1321 aa22.33■■□□□ 1.17
SRSF1-206ENST00000583741 HIP1RO75146 1068 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 MOSPD3O75425 235 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 MICAL2O94851 1124 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 TGM1P22735 817 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 ATP2C1P98194 919 aaPredicted RBP22.33■■□□□ 1.16
SRSF1-206ENST00000583741 VITQ6UXI7 678 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 PDZD4Q76G19 769 aaPredicted RBP22.33■■□□□ 1.16
SRSF1-206ENST00000583741 MAP4K3Q8IVH8 894 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 ACAP3Q96P50 834 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 TRMT61BQ9BVS5 477 aaKnown RBP22.33■■□□□ 1.16
SRSF1-206ENST00000583741 CHRDQ9H2X0 955 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 TMEM134Q9H6X4 195 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 CEP72Q9P209 647 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 PCDHA7Q9UN72 937 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 NUB1Q9Y5A7 615 aa22.33■■□□□ 1.16
SRSF1-206ENST00000583741 E9PMD0 336 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 H7C4K7 107 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 MCF2P10911 925 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 ATXN1P54253 815 aaKnown RBP22.32■■□□□ 1.16
SRSF1-206ENST00000583741 MAPK7Q13164 816 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 CTXN3Q4LDR2 81 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 TPGS2Q68CL5 300 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 TMEM130Q8N3G9 435 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 GPR161Q8N6U8 529 aaKnown RBP22.32■■□□□ 1.16
SRSF1-206ENST00000583741 SNX29Q8TEQ0 813 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 SUSD3Q96L08 255 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 RUSC1Q9BVN2 902 aa22.32■■□□□ 1.16
SRSF1-206ENST00000583741 ZNF334Q9HCZ1 680 aaPredicted RBP22.32■■□□□ 1.16
SRSF1-206ENST00000583741 PP2D1A8MPX8 630 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 MAN2B1O00754 1011 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 ZNF197O14709 1029 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 HARSP12081 509 aaKnown RBP22.31■■□□□ 1.16
SRSF1-206ENST00000583741 GJA1P17302 382 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 GDI1P31150 447 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 RPL9P32969 192 aaKnown RBP22.31■■□□□ 1.16
SRSF1-206ENST00000583741 VIPR2P41587 438 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 TWF1Q12792 350 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 DMP1Q13316 513 aaPredicted RBP22.31■■□□□ 1.16
SRSF1-206ENST00000583741 MPZL3Q6UWV2 235 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 KRI1Q8N9T8 703 aaKnown RBP22.31■■□□□ 1.16
SRSF1-206ENST00000583741 SMARCD2Q92925 531 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 IRF7Q92985 503 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 SECISBP2LQ93073 1101 aaKnown RBP22.31■■□□□ 1.16
SRSF1-206ENST00000583741 ZBTB45Q96K62 511 aaPredicted RBP22.31■■□□□ 1.16
SRSF1-206ENST00000583741 FAM126AQ9BYI3 521 aaPredicted RBP22.31■■□□□ 1.16
SRSF1-206ENST00000583741 PARD6AQ9NPB6 346 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 KMT5AQ9NQR1 393 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 MYH11P35749 1972 aa22.31■■□□□ 1.16
SRSF1-206ENST00000583741 LAD1O00515 517 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 PSMC3P17980 439 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 SEZ6Q53EL9 994 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 CYP4A22Q5TCH4 519 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 ADALQ6DHV7 355 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 ZNF280DQ6N043 979 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 IGSF22Q8N9C0 903 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 TCHPQ9BT92 498 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 TUBGCP4Q9UGJ1 667 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 AFF4Q9UHB7 1163 aaKnown RBP22.3■■□□□ 1.16
SRSF1-206ENST00000583741 FBXO2Q9UK22 296 aaPredicted RBP22.3■■□□□ 1.16
SRSF1-206ENST00000583741 PIAS3Q9Y6X2 628 aa22.3■■□□□ 1.16
SRSF1-206ENST00000583741 CHD8Q9HCK8 2581 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 SLC16A4O15374 487 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 MBD3O95983 291 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 LMNB2Q03252 620 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 PDIA5Q14554 519 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 SKOR2Q2VWA4 1001 aaPredicted RBP22.29■■□□□ 1.16
SRSF1-206ENST00000583741 ARL6IP4Q66PJ3 421 aaKnown RBP22.29■■□□□ 1.16
SRSF1-206ENST00000583741 RNF19BQ6ZMZ0 732 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 FAM3CQ92520 227 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 DDX12PQ92771 950 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 TRPV5Q9NQA5 729 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 USP18Q9UMW8 372 aa22.29■■□□□ 1.16
SRSF1-206ENST00000583741 SRPRBQ9Y5M8 271 aaKnown RBP22.29■■□□□ 1.16
SRSF1-206ENST00000583741 CUTAO60888 179 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 MYL4P12829 197 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 EPHA5P54756 1037 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 LPAL2Q16609 132 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 SLC10A6Q3KNW5 377 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 IQCEQ6IPM2 695 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 MAMSTRQ6ZN01 415 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 KCNK18Q7Z418 384 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 ELMOD1Q8N336 334 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 ZSCAN18Q8TBC5 510 aaPredicted RBP22.28■■□□□ 1.16
SRSF1-206ENST00000583741 DRC1Q96MC2 740 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 ZNF512Q96ME7 567 aaPredicted RBP22.28■■□□□ 1.16
SRSF1-206ENST00000583741 CNTNAP3BQ96NU0 1288 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 CNTNAP3Q9BZ76 1288 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 LMAN1LQ9HAT1 526 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 ANKFY1Q9P2R3 1169 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 CDV3Q9UKY7 258 aaKnown RBP22.28■■□□□ 1.16
SRSF1-206ENST00000583741 DNM3Q9UQ16 869 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 ARNTLO00327 626 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 TRAK2O60296 914 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 CPB1P15086 417 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 CDC25AP30304 524 aa22.28■■□□□ 1.16
SRSF1-206ENST00000583741 PRPHP41219 470 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms