RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 IQCDQ96DY2 449 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 POP1Q99575 1024 aaKnown RBP10.02□□□□□ -0.81
UBBP4-201ENST00000583708 TTPALQ9BTX7 342 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 HERC2P3Q9BVR0 1158 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 MTMR12Q9C0I1 747 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 NDST4Q9H3R1 872 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 SAMSN1Q9NSI8 373 aaKnown RBP10.02□□□□□ -0.81
UBBP4-201ENST00000583708 FNIP2Q9P278 1114 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 TUBGCP4Q9UGJ1 667 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 DPP7Q9UHL4 492 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 SIX4Q9UIU6 781 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 BACE2Q9Y5Z0 518 aa10.02□□□□□ -0.81
UBBP4-201ENST00000583708 TACC1O75410 805 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 KIF4AO95239 1232 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 CST3P01034 146 aaPredicted RBP10.01□□□□□ -0.81
UBBP4-201ENST00000583708 HLA-DRAP01903 254 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 KRT19P08727 400 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 CTSAP10619 480 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 MYOGP15173 224 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 POLR2BP30876 1174 aaKnown RBP10.01□□□□□ -0.81
UBBP4-201ENST00000583708 GCLMP48507 274 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 DLG4P78352 724 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 MYL7Q01449 175 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 DSG1Q02413 1049 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 MRPL58Q14197 206 aaKnown RBP10.01□□□□□ -0.81
UBBP4-201ENST00000583708 DCAF17Q5H9S7 520 aaPredicted RBP10.01□□□□□ -0.81
UBBP4-201ENST00000583708 ZNF667Q5HYK9 610 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 KIAA1841Q6NSI8 718 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 ELMSAN1Q6PJG2 1045 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 DSTYKQ6XUX3 929 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 LIMS2Q7Z4I7 341 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 PPFIBP1Q86W92 1011 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 FMNL3Q8IVF7 1028 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 THEM5Q8N1Q8 247 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 PIK3R5Q8WYR1 880 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 MRPL38Q96DV4 380 aaKnown RBP10.01□□□□□ -0.81
UBBP4-201ENST00000583708 EEF2KMTQ96G04 330 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 SENP8Q96LD8 212 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 CDCA3Q99618 268 aaPredicted RBP10.01□□□□□ -0.81
UBBP4-201ENST00000583708 C17orf80Q9BSJ5 609 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 XYLT2Q9H1B5 865 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 CXCL16Q9H2A7 254 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 RXFP1Q9HBX9 757 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 MRPL17Q9NRX2 175 aaKnown RBP10.01□□□□□ -0.81
UBBP4-201ENST00000583708 MARCH5Q9NX47 278 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 PRG3Q9Y2Y8 225 aaPredicted RBP10.01□□□□□ -0.81
UBBP4-201ENST00000583708 RALGAPA2Q2PPJ7 1873 aa10.01□□□□□ -0.81
UBBP4-201ENST00000583708 OR6C75A6NL08 312 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 CYB561D2O14569 222 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 CBFA2T2O43439 604 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 ITGB1P05556 798 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 URODP06132 367 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 TRIM49P0CI25 452 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 TRIM49CP0CI26 452 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 PCSK1P29120 753 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 PIK3CAP42336 1068 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 GLUD2P49448 558 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 WNT7BP56706 349 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 TNNC1P63316 161 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 GCNT1Q02742 428 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 SMC1AQ14683 1233 aaKnown RBP10□□□□□ -0.81
UBBP4-201ENST00000583708 KRT31Q15323 416 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 EXOC3L4Q17RC7 722 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 ZNF699Q32M78 642 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 WDR72Q3MJ13 1102 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 TIGD5Q53EQ6 642 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 FAM171A1Q5VUB5 890 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 KIAA0319Q5VV43 1072 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 CD300LGQ6UXG3 332 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 TMC7Q7Z402 723 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 UNC93AQ86WB7 457 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 CREBRFQ8IUR6 639 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 VPS52Q8N1B4 723 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 MRPL43Q8N983 215 aaKnown RBP10□□□□□ -0.81
UBBP4-201ENST00000583708 HDAC7Q8WUI4 952 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 ARNTL2Q8WYA1 636 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 EMILIN2Q9BXX0 1053 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 PLCB1Q9NQ66 1216 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 TLR9Q9NR96 1032 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 FBXL5Q9UKA1 691 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 KIAA1257Q9ULG3 409 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 PTPRJQ12913 1337 aa10□□□□□ -0.81
UBBP4-201ENST00000583708 A0A1W2PQC6 194 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 LGALS16A8MUM7 142 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 GABRDO14764 452 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 FSCN2O14926 492 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 B4GALT3O60512 393 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 LILRB3O75022 631 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 VNN1O95497 513 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 CXCL14O95715 111 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 SERPINC1P01008 464 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 WARSP23381 471 aaKnown RBP9.99□□□□□ -0.81
UBBP4-201ENST00000583708 COPB1P53618 953 aaKnown RBP9.99□□□□□ -0.81
UBBP4-201ENST00000583708 MYL6P60660 151 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 YWHAHQ04917 246 aaPredicted RBP9.99□□□□□ -0.81
UBBP4-201ENST00000583708 MAPRE1Q15691 268 aaKnown RBP9.99□□□□□ -0.81
UBBP4-201ENST00000583708 MIIPQ5JXC2 388 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 TPGS2Q68CL5 300 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 ZNF280DQ6N043 979 aa9.99□□□□□ -0.81
UBBP4-201ENST00000583708 TAS1R2Q8TE23 839 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms