RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 LARP1BQ659C4 914 aaKnown RBP7.75□□□□□ -1.17
CTC1-211ENST00000583254 TPGS2Q68CL5 300 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 NAIF1Q69YI7 327 aaPredicted RBP7.75□□□□□ -1.17
CTC1-211ENST00000583254 NOSTRINQ8IVI9 506 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 BICD2Q8TD16 824 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 NUSAP1Q9BXS6 441 aaKnown RBP7.75□□□□□ -1.17
CTC1-211ENST00000583254 LRRC3Q9BY71 257 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 PDZD7Q9H5P4 517 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 SCUBE2Q9NQ36 999 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 FSCN3Q9NQT6 498 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 EVLQ9UI08 416 aaPredicted RBP7.75□□□□□ -1.17
CTC1-211ENST00000583254 FBXL5Q9UKA1 691 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 VAV3Q9UKW4 847 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 NAP1L2Q9ULW6 460 aaPredicted RBP7.75□□□□□ -1.17
CTC1-211ENST00000583254 GDAQ9Y2T3 454 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 ACACAQ13085 2346 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 SHROOM3Q8TF72 1996 aa7.75□□□□□ -1.17
CTC1-211ENST00000583254 ATXN2Q99700 1313 aaKnown RBP7.75□□□□□ -1.17
CTC1-211ENST00000583254 PTPRDP23468 1912 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 TRDMT1O14717 391 aaKnown RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 N4BP3O15049 544 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 SLC37A4O43826 429 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 DKC1O60832 514 aaKnown RBP eCLIP7.74□□□□□ -1.17
CTC1-211ENST00000583254 CPB1P15086 417 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 PLCB2Q00722 1185 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 POU5F1BQ06416 359 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 SOX4Q06945 474 aaPredicted RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 PPP2R5CQ13362 524 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 UPP1Q16831 310 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 CTXN3Q4LDR2 81 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 USP39Q53GS9 565 aaKnown RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 GPR158Q5T848 1215 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 TRIM68Q6AZZ1 485 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 RNF19BQ6ZMZ0 732 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 ARMCX6Q7L4S7 300 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 LURAP1LQ8IV03 231 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 C4orf19Q8IY42 314 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 CCDC148Q8NFR7 591 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 BPIFB1Q8TDL5 484 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 DYDC2Q96IM9 177 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 PPP1R10Q96QC0 940 aaKnown RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 POLR3CQ9BUI4 534 aaPredicted RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 NFKBIZQ9BYH8 718 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 POLR3FQ9H1D9 316 aaPredicted RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 DNAJC25Q9H1X3 360 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 SLKQ9H2G2 1235 aaPredicted RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 HPS4Q9NQG7 708 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 OBP2AQ9NY56 170 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 RGL1Q9NZL6 768 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 VPS54Q9P1Q0 977 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 EBF1Q9UH73 591 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 AFF4Q9UHB7 1163 aaKnown RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 MBD1Q9UIS9 605 aaPredicted RBP7.74□□□□□ -1.17
CTC1-211ENST00000583254 USP20Q9Y2K6 914 aa7.74□□□□□ -1.17
CTC1-211ENST00000583254 PI4KAP42356 2102 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 PTPRBP23467 1997 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 PCDH15Q96QU1 1955 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 CYP3A7-CYP3A51PA0A087WV96 503 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 OTOL1A6NHN0 477 aaPredicted RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 LRRIQ4A6NIV6 560 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 UPK3BL1B0FP48 263 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 UPK3BL2E5RIL1 263 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 H7C4K7 107 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 IGHDP01880 384 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 CYP3A7P24462 503 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 ARL2P36404 184 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 MCM2P49736 904 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 CYP4F8P98187 520 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 CYP4A11Q02928 519 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 RUNX3Q13761 415 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 CTTNQ14247 550 aaKnown RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 TMEM132AQ24JP5 1023 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 EEF1DP3Q658K8 133 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 CREB3L3Q68CJ9 461 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 ZNF280DQ6N043 979 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 CCNI2Q6ZMN8 369 aaPredicted RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 PPP4R3CPQ6ZMV5 832 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 GAREM2Q75VX8 874 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 SYT13Q7L8C5 426 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 OTUD6AQ7L8S5 288 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 C11orf74Q86VG3 221 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 HDDC3Q8N4P3 179 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 PNPLA1Q8N8W4 532 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 DAGLBQ8NCG7 672 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 TSTD1Q8NFU3 115 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 SLC39A7Q92504 469 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 ACDQ96AP0 544 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 UROC1Q96N76 676 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 UBL7Q96S82 380 aaPredicted RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 GTPBP2Q9BX10 602 aaKnown RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 LSG1Q9H089 658 aaKnown RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 SMG9Q9H0W8 520 aaKnown RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 ATXN3LQ9H3M9 355 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 EBF3Q9H4W6 596 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 FBRSL1Q9HCM7 1045 aaKnown RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 TMEM74BQ9NUR3 256 aa7.73□□□□□ -1.17
CTC1-211ENST00000583254 PRMT7Q9NVM4 692 aaPredicted RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 DDX25Q9UHL0 483 aaKnown RBP7.73□□□□□ -1.17
CTC1-211ENST00000583254 CFAP46Q8IYW2 2715 aa7.72□□□□□ -1.17
CTC1-211ENST00000583254 ASXL3Q9C0F0 2248 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms