RNA–Protein interactions for RNA: ENST00000582604.1

SPECC1-219, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3

Gene SPECC1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-219ENST00000582604 DNAJC12Q9UKB3 198 aa12.09□□□□□ -0.47
SPECC1-219ENST00000582604 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
SPECC1-219ENST00000582604 TRIP11Q15643 1979 aa12.09□□□□□ -0.47
SPECC1-219ENST00000582604 TET1Q8NFU7 2136 aa12.08□□□□□ -0.47
SPECC1-219ENST00000582604 RANBP2P49792 3224 aaKnown RBP12.08□□□□□ -0.48
SPECC1-219ENST00000582604 TADA2AO75478 443 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.48
SPECC1-219ENST00000582604 ODC1P11926 461 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 FERP16591 822 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 KRT9P35527 623 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 OR1G1P47890 313 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 LHX1P48742 406 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 LILRA4P59901 499 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 KRT17Q04695 432 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 DSC1Q08554 894 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 CUL2Q13617 745 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 RAPGEF1Q13905 1077 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 HABP4Q5JVS0 413 aaKnown RBP12.08□□□□□ -0.48
SPECC1-219ENST00000582604 SFMBT2Q5VUG0 894 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 UNC93AQ86WB7 457 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 COLGALT2Q8IYK4 626 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 THEM5Q8N1Q8 247 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 TXLNBQ8N3L3 684 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 FIBCD1Q8N539 461 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 LMO3Q8TAP4 145 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 TRIM44Q96DX7 344 aaPredicted RBP12.08□□□□□ -0.48
SPECC1-219ENST00000582604 RNPC3Q96LT9 517 aaKnown RBP12.08□□□□□ -0.48
SPECC1-219ENST00000582604 ZNF558Q96NG5 402 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 SAMD11Q96NU1 681 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 NXF1Q9UBU9 619 aaKnown RBP12.08□□□□□ -0.48
SPECC1-219ENST00000582604 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 KIAA1257Q9ULG3 409 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 SSX2IPQ9Y2D8 614 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 PTPRJQ12913 1337 aa12.08□□□□□ -0.48
SPECC1-219ENST00000582604 CEP290O15078 2479 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 TLL1O43897 1013 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 IPO7O95373 1038 aaKnown RBP12.07□□□□□ -0.48
SPECC1-219ENST00000582604 VNN1O95497 513 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 ANXA13P27216 316 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 CLCNKBP51801 687 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 HTRA4P83105 476 aaPredicted RBP12.07□□□□□ -0.48
SPECC1-219ENST00000582604 PTK2Q05397 1052 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 STILQ15468 1287 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 RRAGAQ7L523 313 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 HERC6Q8IVU3 1022 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 CPLX3Q8WVH0 158 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 C18orf25Q96B23 403 aaPredicted RBP12.07□□□□□ -0.48
SPECC1-219ENST00000582604 ZNF689Q96CS4 500 aaPredicted RBP12.07□□□□□ -0.48
SPECC1-219ENST00000582604 PDLIM2Q96JY6 352 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 TNIP3Q96KP6 325 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 PANX2Q96RD6 677 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 SNX25Q9H3E2 840 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 LUC7LQ9NQ29 371 aaKnown RBP12.07□□□□□ -0.48
SPECC1-219ENST00000582604 MIOSQ9NXC5 875 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
SPECC1-219ENST00000582604 SIX4Q9UIU6 781 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 SNX9Q9Y5X1 595 aa12.07□□□□□ -0.48
SPECC1-219ENST00000582604 SF3B1O75533 1304 aaKnown RBP eCLIP12.07□□□□□ -0.48
SPECC1-219ENST00000582604 CASTOR2A6NHX0 329 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 MEIS3P2A8K0S8 358 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 CYB561D2O14569 222 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 SYN3O14994 580 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 AP5Z1O43299 807 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 MED7O43513 233 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 MFAP3LO75121 409 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 TACC1O75410 805 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 TYMPP19971 482 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 PCSK1P29120 753 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 CASP14P31944 242 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 SOX5P35711 763 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 WNT7BP56706 349 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 DEFB103AP81534 67 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 CREMQ03060 361 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 LRMPQ12912 555 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 TBX2Q13207 712 aaPredicted RBP12.06□□□□□ -0.48
SPECC1-219ENST00000582604 MAPRE1Q15691 268 aaKnown RBP12.06□□□□□ -0.48
SPECC1-219ENST00000582604 NAB2Q15742 525 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 RAB30Q15771 203 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 ASIC2Q16515 512 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 PHLDB3Q6NSJ2 640 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 C16orf59Q7L2K0 433 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 ZNF677Q86XU0 584 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 SEMA4DQ92854 862 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 TMEM169Q96HH4 297 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 PPP1R9BQ96SB3 815 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 XYLT2Q9H1B5 865 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 GANQ9H2C0 597 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 NRDE2Q9H7Z3 1164 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 NLRC4Q9NPP4 1024 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 RNF19AQ9NV58 838 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 ADAM28Q9UKQ2 775 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 PLAGL2Q9UPG8 496 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 CEP83Q9Y592 693 aa12.06□□□□□ -0.48
SPECC1-219ENST00000582604 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.05□□□□□ -0.48
SPECC1-219ENST00000582604 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.05□□□□□ -0.48
SPECC1-219ENST00000582604 H7C4K7 107 aa12.05□□□□□ -0.48
SPECC1-219ENST00000582604 NRP1O14786 923 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms