RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 POLR3FQ9H1D9 316 aaPredicted RBP8.39□□□□□ -1.07
CCDC47-205ENST00000582331 FZD8Q9H461 694 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 VPS45Q9NRW7 570 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 C2orf42Q9NWW7 574 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 PCDHGA5Q9Y5G8 931 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 INSL5Q9Y5Q6 135 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 COL4A2P08572 1712 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 VWA8A3KMH1 1905 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 GREB1Q4ZG55 1949 aa8.39□□□□□ -1.07
CCDC47-205ENST00000582331 CCDC163A0A0D9SF12 145 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 CCDC194A0A1B0GVG4 234 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 MYBPHLA2RUH7 354 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 SPECC1L-ADORA2AF8WAN1 911 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 H7C4K7 107 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 CCNT1O60563 726 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 RNF40O75150 1001 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 LYPLA2O95372 231 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 DEXIO95424 95 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 BAG4O95429 457 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 CCDC192P0DO97 292 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 GCFC2P16383 781 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 GJA1P17302 382 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 HOXC13P31276 330 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 CTHP32929 405 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 MPLP40238 635 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 BRCC3P46736 316 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 SOX9P48436 509 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 PXNP49023 591 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 CCT2P78371 535 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 PRPF4BQ13523 1007 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 TEAD2Q15562 447 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 UPP1Q16831 310 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 FAM187BQ17R55 369 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 SWT1Q5T5J6 900 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 TPGS2Q68CL5 300 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 TXNDC11Q6PKC3 985 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 BLOC1S2Q6QNY1 142 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 LRSAM1Q6UWE0 723 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 MAEAQ7L5Y9 396 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 NEK8Q86SG6 692 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 RALGPS2Q86X27 583 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 FAM177A1Q8N128 213 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 NAP1L4Q99733 375 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 EIF2AK1Q9BQI3 630 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 ADPGKQ9BRR6 497 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 SMOC1Q9H4F8 434 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 PDZD7Q9H5P4 517 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 SLITRK6Q9H5Y7 841 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 NCOA5Q9HCD5 579 aaKnown RBP8.38□□□□□ -1.07
CCDC47-205ENST00000582331 GDAQ9Y2T3 454 aa8.38□□□□□ -1.07
CCDC47-205ENST00000582331 F5P12259 2224 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 NCANO14594 1321 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 SRRM3A6NNA2 597 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-205ENST00000582331 C4orf47A7E2U8 309 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 GIPC1O14908 333 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 EXTL3O43909 919 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 AKAP3O75969 853 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 PRKCBP05771 671 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 SPINK2P20155 84 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 PDIA3P30101 505 aaKnown RBP8.37□□□□□ -1.07
CCDC47-205ENST00000582331 RARRES1P49788 294 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 EPHA5P54756 1037 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 ZNF252P-AS1Q0IIN9 211 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 FCHO2Q0JRZ9 810 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 TWF1Q12792 350 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 CCINQ13939 588 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 PON2Q15165 354 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 NPY5RQ15761 445 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 MAPK6Q16659 721 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 C8orf34Q49A92 452 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 GLRA4Q5JXX5 417 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 DAB2IPQ5VWQ8 1189 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 HAUS6Q7Z4H7 955 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 SLFN12Q8IYM2 578 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 FBXL16Q8N461 479 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 C3orf58Q8NDZ4 430 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 TTC8Q8TAM2 541 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 RSPRY1Q96DX4 576 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 ZC3H10Q96K80 434 aaKnown RBP8.37□□□□□ -1.07
CCDC47-205ENST00000582331 JAKMIP1Q96N16 626 aaKnown RBP8.37□□□□□ -1.07
CCDC47-205ENST00000582331 PPP1R10Q96QC0 940 aaKnown RBP8.37□□□□□ -1.07
CCDC47-205ENST00000582331 HSD17B14Q9BPX1 270 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 EDEM2Q9BV94 578 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 C2orf40Q9H1Z8 148 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 ASAH2Q9NR71 780 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 CEP72Q9P209 647 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 DAXXQ9UER7 740 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-205ENST00000582331 MAFFQ9ULX9 164 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 SLC8A2Q9UPR5 921 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 WASF3Q9UPY6 502 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 ARID2Q68CP9 1835 aa8.37□□□□□ -1.07
CCDC47-205ENST00000582331 A0A087WWV3 80 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 ACKR2O00590 384 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 SYN3O14994 580 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 USO1O60763 962 aaKnown RBP8.36□□□□□ -1.07
CCDC47-205ENST00000582331 ATG13O75143 517 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 XRCC6P12956 609 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC47-205ENST00000582331 LIG1P18858 919 aa8.36□□□□□ -1.07
CCDC47-205ENST00000582331 RING1Q06587 406 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms