RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PCIF1Q9H4Z3 704 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 DPP3Q9NY33 737 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.12■□□□□ 0.97
SREBF1-220ENST00000581707 SERTAD1Q9UHV2 236 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 TIMM13Q9Y5L4 95 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-220ENST00000581707 DOCK8Q8NF50 2099 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 GOLGA8IPA6NC78 632 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 GOLGA8JA6NMD2 632 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 EXTL3O43909 919 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 OAZ2O95190 189 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 POU2F2P09086 479 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 ATF2P15336 505 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 TPGS2Q68CL5 300 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 ARMCX5Q6P1M9 558 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 EPM2AIP1Q7L775 607 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-220ENST00000581707 USP37Q86T82 979 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 NT5DC4Q86YG4 428 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 BRSK2Q8IWQ3 736 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 EFCAB13Q8IY85 973 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 UBALD2Q8IYN6 164 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 ZNF507Q8TCN5 953 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 NOC3LQ8WTT2 800 aaKnown RBP21.11■□□□□ 0.97
SREBF1-220ENST00000581707 MYADMQ96S97 322 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 RBAKQ9NYW8 714 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-220ENST00000581707 SCN1AP35498 2009 aa21.11■□□□□ 0.97
SREBF1-220ENST00000581707 A0A1B0GVL5 298 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 PVALEFA0A1B0GWK0 134 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 PRRG1O14668 218 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 KIAA0391O15091 583 aaKnown RBP21.1■□□□□ 0.97
SREBF1-220ENST00000581707 PFKFB1P16118 471 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 FSHRP23945 695 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 HOXD13P35453 343 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 EHHADHQ08426 723 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 CUL4BQ13620 913 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 BMP8AQ7Z5Y6 402 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 GRAMD1CQ8IYS0 662 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 PBXIP1Q96AQ6 731 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 SENP8Q96LD8 212 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 MFSD14AQ96MC6 490 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 OXCT2Q9BYC2 517 aaPredicted RBP21.1■□□□□ 0.97
SREBF1-220ENST00000581707 SCAND2PQ9GZW5 306 aaPredicted RBP21.1■□□□□ 0.97
SREBF1-220ENST00000581707 KCNK12Q9HB15 430 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 CYP4F11Q9HBI6 524 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 EPS15L1Q9UBC2 864 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 HCN4Q9Y3Q4 1203 aa21.1■□□□□ 0.97
SREBF1-220ENST00000581707 ARHGEF37A1IGU5 675 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 SPTLC1O15269 473 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 ACTN4O43707 911 aaKnown RBP21.09■□□□□ 0.97
SREBF1-220ENST00000581707 ODC1P11926 461 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 TYMPP19971 482 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 WNT7BP56706 349 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 NTHL1P78549 312 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 GET4Q7L5D6 327 aaPredicted RBP21.09■□□□□ 0.97
SREBF1-220ENST00000581707 TCEAL8Q8IYN2 117 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 GPD1LQ8N335 351 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 CACTINQ8WUQ7 758 aaKnown RBP21.09■□□□□ 0.97
SREBF1-220ENST00000581707 PAGE5Q96GU1 130 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 IGSF9Q9P2J2 1179 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 AFF4Q9UHB7 1163 aaKnown RBP21.09■□□□□ 0.97
SREBF1-220ENST00000581707 USP25Q9UHP3 1055 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 MAFFQ9ULX9 164 aa21.09■□□□□ 0.97
SREBF1-220ENST00000581707 SEC24AO95486 1093 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 CPB1P15086 417 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 TAF6P49848 677 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 TFAMQ00059 246 aaKnown RBP21.08■□□□□ 0.97
SREBF1-220ENST00000581707 ADCY1Q08828 1119 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 OVOS1Q6IE37 1185 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 ASIC4Q96FT7 647 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 SMOC2Q9H3U7 446 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 HCFC1R1Q9NWW0 138 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 HPSEQ9Y251 543 aa21.08■□□□□ 0.97
SREBF1-220ENST00000581707 UBE4BO95155 1302 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 ZNF233A6NK53 670 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 OR6C75A6NL08 312 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 LRG1P02750 347 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 LAMP2P13473 410 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 TDGQ13569 410 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 RNF19BQ6ZMZ0 732 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 NELFCDQ8IXH7 590 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 SCFD1Q8WVM8 642 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 PDE11AQ9HCR9 933 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 SLC39A2Q9NP94 309 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 HSPBP1Q9NZL4 362 aa21.07■□□□□ 0.96
SREBF1-220ENST00000581707 DNMT3BQ9UBC3 853 aaKnown RBP21.07■□□□□ 0.96
SREBF1-220ENST00000581707 NOTCH4Q99466 2003 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 ZDBF2Q9HCK1 2354 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 CYB561D2O14569 222 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 TGFB1I1O43294 461 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 CYP11A1P05108 521 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 SYKP43405 635 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 PABPC1LQ4VXU2 614 aaKnown RBP21.06■□□□□ 0.96
SREBF1-220ENST00000581707 ITFG1Q8TB96 612 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 NXPE3Q969Y0 559 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 KIAA1586Q9HCI6 787 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 DSEQ9UL01 958 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 CDH7Q9ULB5 785 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 INSL5Q9Y5Q6 135 aa21.06■□□□□ 0.96
SREBF1-220ENST00000581707 ZFP37Q9Y6Q3 630 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-220ENST00000581707 FAM237AA0A1B0GTK4 181 aa21.05■□□□□ 0.96
SREBF1-220ENST00000581707 OR4Q2P0C623 313 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms