RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 NAV2Q8IVL1 2488 aa15.24■□□□□ 0.03
CSNK1D-219ENST00000581660 APC2O95996 2303 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 KIF26AQ9ULI4 1882 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 CELSR3Q9NYQ7 3312 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 LRRIQ4A6NIV6 560 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 KHNYNO15037 678 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 WEE1P30291 646 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 ITPRIPL2Q3MIP1 535 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 NCAPH2Q6IBW4 605 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 GALNT17Q6IS24 598 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 FSTL4Q6MZW2 842 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 KIAA1211LQ6NV74 962 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 KRT25Q7Z3Z0 450 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 FBXL16Q8N461 479 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 DEFB124Q8NES8 71 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 BEST2Q8NFU1 509 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 HSD17B14Q9BPX1 270 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 ADPGKQ9BRR6 497 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 GOLGA2P5Q9HBQ8 144 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 EBF1Q9UH73 591 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 KLK13Q9UKR3 277 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 TRIP11Q15643 1979 aa15.23■□□□□ 0.03
CSNK1D-219ENST00000581660 A0A1W2PRU2 124 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 RARRES1P49788 294 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 FGD1P98174 961 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 SOX4Q06945 474 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 TNK2Q07912 1038 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 PRPF4BQ13523 1007 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 DCAF4L1Q3SXM0 396 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 STXBP5Q5T5C0 1151 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 EEF1DP3Q658K8 133 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 ZBTB8OSQ8IWT0 167 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 BRF1Q92994 677 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 CCDC113Q9H0I3 377 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 C2orf40Q9H1Z8 148 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 TPCN1Q9ULQ1 816 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 GDAQ9Y2T3 454 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 YIPF1Q9Y548 306 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 ABCA7Q8IZY2 2146 aa15.22■□□□□ 0.03
CSNK1D-219ENST00000581660 SMIM28A0A1B0GU29 152 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 ACKR2O00590 384 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 TRDMT1O14717 391 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 DCLK1O15075 740 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 GRSF1Q12849 480 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 PTPAQ15257 358 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 MAPK6Q16659 721 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 CTXN3Q4LDR2 81 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 XKR4Q5GH76 650 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 PMS2CLQ68D20 193 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 ZNF280DQ6N043 979 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 Q6ZUG5 572 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 C11orf74Q86VG3 221 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 CHFRQ96EP1 664 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 DNAJC25Q9H1X3 360 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 GPRC5CQ9NQ84 441 aa15.21■□□□□ 0.03
CSNK1D-219ENST00000581660 ATG2BQ96BY7 2078 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 H0Y626 953 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 PODXLO00592 558 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 DPYSL4O14531 572 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 RNF40O75150 1001 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 TRIM16O95361 564 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 VNN2O95498 520 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 EDN1P05305 212 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 PLD1Q13393 1074 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 RNF19BQ6ZMZ0 732 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 NEK8Q86SG6 692 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 SKAP1Q86WV1 359 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 BPIFB1Q8TDL5 484 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 SUSD3Q96L08 255 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 HHIPQ96QV1 700 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 EIF2AK1Q9BQI3 630 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 AGXT2Q9BYV1 514 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 SLC32A1Q9H598 525 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 POLR3BQ9NW08 1133 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 ANKFY1Q9P2R3 1169 aa15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 EVLQ9UI08 416 aaPredicted RBP15.2■□□□□ 0.02
CSNK1D-219ENST00000581660 UPK3BL1B0FP48 263 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 UPK3BL2E5RIL1 263 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 ZIC2O95409 532 aaPredicted RBP15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 PRAMEF12O95522 483 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 APBB3O95704 486 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 XRCC6P12956 609 aaKnown RBP eCLIP15.19■□□□□ 0.023e-10■□□□□ 9.9
CSNK1D-219ENST00000581660 MCM2P49736 904 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 TMEM132AQ24JP5 1023 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 ALKAL1Q6UXT8 129 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 GAREM2Q75VX8 874 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 SYT13Q7L8C5 426 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 PIP4P1Q86T03 277 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 SLFN12Q8IYM2 578 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 TRIM22Q8IYM9 498 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 MCPH1Q8NEM0 835 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 CCDC43Q96MW1 224 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 NAP1L4Q99733 375 aaKnown RBP15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 SLC38A7Q9NVC3 462 aa15.19■□□□□ 0.02
CSNK1D-219ENST00000581660 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
CSNK1D-219ENST00000581660 PATE3B3GLJ2 98 aa15.18■□□□□ 0.02
CSNK1D-219ENST00000581660 MEFVO15553 781 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms