RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 NEURL1BA8MQ27 555 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 HNRNPCL3B7ZW38 293 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 M0R2C6 588 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 SGK1O00141 431 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 DDX3YO15523 660 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 CTIFO43310 598 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 RANBP6O60518 1105 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 USO1O60763 962 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 DGKIO75912 1065 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 CD2BP2O95400 341 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 TIMP1P01033 207 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 HNRNPCL4P0DMR1 293 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 FDX1P10109 184 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 CKBP12277 381 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 CYBAP13498 195 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 PDGFRAP16234 1089 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 HERVK_113P62684 666 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 ERVK-9P63128 1117 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 ERVK-24P63145 666 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 PPP2R3AQ06190 1150 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 VAC14Q08AM6 782 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 HSPA14Q0VDF9 509 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 FAAP100Q0VG06 881 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 PPIGQ13427 754 aaKnown RBP eCLIP7.23□□□□□ -1.25
SENP3-206ENST00000581093 SPCS2Q15005 226 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 WDR43Q15061 677 aaKnown RBP eCLIP7.23□□□□□ -1.25
SENP3-206ENST00000581093 SAFBQ15424 915 aaKnown RBP eCLIP7.23□□□□□ -1.25
SENP3-206ENST00000581093 ECM1Q16610 540 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 CWF19L2Q2TBE0 894 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 CCDC38Q502W7 563 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 LIN54Q6MZP7 749 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 MFSD5Q6N075 450 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 LDHAL6AQ6ZMR3 332 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 CCDC81Q6ZN84 652 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 CAND1Q86VP6 1230 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 GLYCTKQ8IVS8 523 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 APLFQ8IW19 511 aaPredicted RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 FAM178BQ8IXR5 827 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 LRRC71Q8N4P6 559 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 XXYLT1Q8NBI6 393 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 UTP15Q8TED0 518 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 SHC3Q92529 594 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 ANKS1AQ92625 1134 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 ALKBH8Q96BT7 664 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 FAM167AQ96KS9 214 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 DESI2Q9BSY9 194 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 CCDC106Q9BWC9 280 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 RHOBTB2Q9BYZ6 727 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 INTS2Q9H0H0 1204 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 TOPORSQ9NS56 1045 aaPredicted RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 EMC3Q9P0I2 261 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 VPS18Q9P253 973 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 RBPJLQ9UBG7 517 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 KIAA1257Q9ULG3 409 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 ZNF148Q9UQR1 794 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 ZKSCAN5Q9Y2L8 839 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 CHTOPQ9Y3Y2 248 aaKnown RBP7.23□□□□□ -1.25
SENP3-206ENST00000581093 MROH5Q6ZUA9 1318 aa7.23□□□□□ -1.25
SENP3-206ENST00000581093 VPS13AQ96RL7 3174 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 MAP1BP46821 2468 aaKnown RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 ABHD14A-ACY1A0A1B0GW23 586 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 PI4KAP2A4QPH2 592 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 HAT1O14929 419 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 DCXO43602 365 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 STRNO43815 780 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 SOCS5O75159 536 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 GLRX3O76003 335 aaKnown RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 CD4P01730 458 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 OPN1MWP04001 364 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 PGRP06401 933 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 HOXC6P09630 235 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 OPN1MW2P0DN77 364 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 OPN1MW3P0DN78 364 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 SCG2P13521 617 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 TMEM11P17152 192 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 ARF4P18085 180 aaPredicted RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 POLR2EP19388 210 aaKnown RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 ANXA13P27216 316 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 HOXA7P31268 230 aaPredicted RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 MAPK9P45984 424 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 FRG1Q14331 258 aaKnown RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 GCKRQ14397 625 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 SLC9A5Q14940 896 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 CCDC153Q494R4 210 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 CEP55Q53EZ4 464 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 KCNT1Q5JUK3 1230 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 ZMYM1Q5SVZ6 1142 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 BEND6Q5SZJ8 279 aaPredicted RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 RNASEH2BQ5TBB1 312 aaKnown RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 KLC3Q6P597 504 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 CCDC62Q6P9F0 684 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 PSRC1Q6PGN9 363 aaPredicted RBP7.22□□□□□ -1.25
SENP3-206ENST00000581093 LRRC31Q6UY01 552 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 MFSD6Q6ZSS7 791 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 HFE2Q6ZVN8 426 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 ZNF365Q70YC5 407 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 ANKRD33Q7Z3H0 272 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 FAM9CQ8IZT9 166 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 PI4KAP1Q8N8J0 262 aa7.22□□□□□ -1.25
SENP3-206ENST00000581093 OR8K1Q8NGG5 319 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms