RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 EIF4A3P38919 411 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PRKCIP41743 596 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CNKSR3Q6P9H4 555 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GLB1LQ6UWU2 654 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FAM71AQ8IYT1 594 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 LRRC52Q8N7C0 313 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 JAKMIP2Q96AA8 810 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CCDC42Q96M95 316 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 DEF6Q9H4E7 631 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 HAUS4Q9H6D7 363 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ELAC1Q9H777 363 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 BZW2Q9Y6E2 419 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SSU72P8A0A1W2PR75 194 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PIRO00625 290 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FGFR1P11362 822 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 P4HA1P13674 534 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 LRPAP1P30533 357 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ASPAP45381 313 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 KCNJ6P48051 423 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TNNC1P63316 161 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 GRIK3Q13003 919 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 NAB2Q15742 525 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 CLLU1OSQ5K130 101 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 TOGARAM2Q6ZUX3 1019 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 VWCEQ96DN2 955 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 FAXDC2Q96IV6 333 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 ZNF560Q96MR9 790 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 LRFN2Q9ULH4 789 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 PCDHB4Q9Y5E5 795 aa14.83□□□□□ -0.03
CDK5RAP3-219ENST00000580670 SCN1AP35498 2009 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 INPPL1O15357 1258 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CYP26A1O43174 497 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 WEE2P0C1S8 567 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CSF2RAP15509 400 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ACO1P21399 889 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CYLC1P35663 651 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PTK2Q05397 1052 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 IKBKEQ14164 716 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 MFSD5Q6N075 450 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CCDC170Q8IYT3 715 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TMEM199Q8N511 208 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 URGCPQ8TCY9 931 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 BCO2Q9BYV7 579 aa14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 EPN1Q9Y6I3 576 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-219ENST00000580670 AKR1B10O60218 316 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 NDUFA10O95299 355 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CD58P19256 250 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PNPLA4P41247 253 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 RAP1GAPP47736 663 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 YWHAEP62258 255 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TMEM270Q6UE05 265 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ZNF571Q7Z3V5 609 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 C17orf53Q8N3J3 647 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 UBR7Q8N806 425 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 MMS19Q96T76 1030 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 DESI2Q9BSY9 194 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.82□□□□□ -0.041e-6■□□□□ 8
CDK5RAP3-219ENST00000580670 SMYD3Q9H7B4 428 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CISHQ9NSE2 258 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CACNG4Q9UBN1 327 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PRKAG2Q9UGJ0 569 aa14.82□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TTC3P53804 2025 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 MICAL3Q7RTP6 2002 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CASTOR2A6NHX0 329 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TAF6P49848 677 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 KIF11P52732 1056 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SV2CQ496J9 727 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 NOMO2Q5JPE7 1267 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ABI1Q8IZP0 508 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CYP3A43Q9HB55 503 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PCDH10Q9P2E7 1040 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CNTN6Q9UQ52 1028 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SNX9Q9Y5X1 595 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TDRD15B5MCY1 1934 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ALPK3Q96L96 1907 aa14.81□□□□□ -0.04
CDK5RAP3-219ENST00000580670 PODXLO00592 558 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CTIFO43310 598 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 RPL9P32969 192 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CLCNKBP51801 687 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 CDH8P55286 799 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 TUSC3Q13454 348 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ASTE1Q2TB18 679 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.8□□□□□ -0.041e-10■■■■■ 46
CDK5RAP3-219ENST00000580670 SLC47A2Q86VL8 602 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 NPAS4Q8IUM7 802 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 RPUSD2Q8IZ73 545 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 RBBP8NLQ8NC74 664 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ACRBPQ8NEB7 543 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SDCBP2Q9H190 292 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 ACP6Q9NPH0 428 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 KANSL3Q9P2N6 904 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 KPNA7A9QM74 516 aa14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 EIF3CLB5ME19 914 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-219ENST00000580670 SPTLC1O15269 473 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms