RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 AP3M2P53677 418 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 SPAG1Q07617 926 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 TMEM132DQ14C87 1099 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 ZBTB6Q15916 424 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 CCDC40Q4G0X9 1142 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 ERMP1Q7Z2K6 904 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 TRIM59Q8IWR1 403 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 MICAL1Q8TDZ2 1067 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
CCDC84-209ENST00000580556 ZFP42Q96MM3 310 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 FNBP1Q96RU3 617 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 HSD3B7Q9H2F3 369 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 KLK14Q9P0G3 267 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
CCDC84-209ENST00000580556 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 MYO10Q9HD67 2058 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 CITO14578 2027 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 STX10O60499 249 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 GTF2H1P32780 548 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 SCNN1GP51170 649 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 VAMP7P51809 220 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 WNT7BP56706 349 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 ERVFC1P60507 584 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 DSC1Q08554 894 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 NAB2Q15742 525 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 TCP11X2Q5H9J9 407 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 JADE1Q6IE81 842 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 EFCAB13Q8IY85 973 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 PLEKHO2Q8TD55 490 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 SLC35C1Q96A29 364 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 ZMAT2Q96NC0 199 aaKnown RBP13.11□□□□□ -0.31
CCDC84-209ENST00000580556 S1PR5Q9H228 398 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 SAMSN1Q9NSI8 373 aaKnown RBP13.11□□□□□ -0.31
CCDC84-209ENST00000580556 TBC1D13Q9NVG8 400 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 INTS13Q9NVM9 706 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
CCDC84-209ENST00000580556 UBQLN1Q9UMX0 589 aaKnown RBP13.11□□□□□ -0.31
CCDC84-209ENST00000580556 ANK1P16157 1881 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 PDCD11Q14690 1871 aaKnown RBP13.1□□□□□ -0.31
CCDC84-209ENST00000580556 LRRIQ3A6PVS8 624 aaPredicted RBP13.1□□□□□ -0.31
CCDC84-209ENST00000580556 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 KCNJ18B7U540 433 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 GOLGA6L19H0YKK7 550 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 PMM2O15305 246 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 NFICP08651 508 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 DLATP10515 647 aaKnown RBP13.1□□□□□ -0.31
CCDC84-209ENST00000580556 AFF1P51825 1210 aaKnown RBP13.1□□□□□ -0.31
CCDC84-209ENST00000580556 TPM4P67936 248 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 KCNJ12Q14500 433 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 C1orf220Q5T0J3 134 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 SYCE2Q6PIF2 218 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 LUZP1Q86V48 1076 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 ANKRD20A12PQ8NF67 263 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 CACTINQ8WUQ7 758 aaKnown RBP13.1□□□□□ -0.31
CCDC84-209ENST00000580556 CCDC127Q96BQ5 260 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 UROC1Q96N76 676 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 MIOSQ9NXC5 875 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 INPP5FQ9Y2H2 1132 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 FNDC1Q4ZHG4 1894 aaPredicted RBP13.1□□□□□ -0.31
CCDC84-209ENST00000580556 PTPRJQ12913 1337 aa13.1□□□□□ -0.31
CCDC84-209ENST00000580556 MED19A0JLT2 244 aaPredicted RBP13.09□□□□□ -0.31
CCDC84-209ENST00000580556 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 TNNI1P19237 187 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 LRPAP1P30533 357 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 RPL9P32969 192 aaKnown RBP13.09□□□□□ -0.31
CCDC84-209ENST00000580556 RNASELQ05823 741 aaKnown RBP13.09□□□□□ -0.31
CCDC84-209ENST00000580556 TUSC3Q13454 348 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 DUSP6Q16828 381 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 GLRA4Q5JXX5 417 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 LLGL2Q6P1M3 1020 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 NKD2Q969F2 451 aaPredicted RBP13.09□□□□□ -0.31
CCDC84-209ENST00000580556 ANKRD36BP1Q96IX9 119 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 TMEM175Q9BSA9 504 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 MTMR12Q9C0I1 747 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 CXCL16Q9H2A7 254 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
CCDC84-209ENST00000580556 ITGA11Q9UKX5 1188 aa13.09□□□□□ -0.31
CCDC84-209ENST00000580556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC84-209ENST00000580556 P4HA2O15460 535 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 N4BP1O75113 896 aaKnown RBP13.08□□□□□ -0.32
CCDC84-209ENST00000580556 POMCP01189 267 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 TNNC2P02585 160 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 TRIM49P0CI25 452 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 TRIM49CP0CI26 452 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 PAX3P23760 479 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.32
CCDC84-209ENST00000580556 NUBP1P53384 320 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 DLG4P78352 724 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 TFAMQ00059 246 aaKnown RBP13.08□□□□□ -0.32
CCDC84-209ENST00000580556 KCNC3Q14003 757 aa13.08□□□□□ -0.32
CCDC84-209ENST00000580556 MAN2A1Q16706 1144 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms