RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 EFCAB13Q8IY85 973 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 CACTINQ8WUQ7 758 aaKnown RBP11.79□□□□□ -0.52
NDEL1-208ENST00000580237 KHSRPQ92945 711 aaKnown RBP eCLIP11.79□□□□□ -0.523e-6■■■□□ 18.3
NDEL1-208ENST00000580237 HSPBP1Q9NZL4 362 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 FBXL5Q9UKA1 691 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 HPSEQ9Y251 543 aa11.79□□□□□ -0.52
NDEL1-208ENST00000580237 ZNF233A6NK53 670 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 PI4K2BG5E9Z4 385 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 CCL16O15467 120 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 LRG1P02750 347 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 KRT19P08727 400 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 HNRNPA1P09651 372 aaKnown RBP eCLIP11.78□□□□□ -0.52
NDEL1-208ENST00000580237 TAF6P49848 677 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 SURF1Q15526 300 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 KMT5BQ4FZB7 885 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 TMEM31Q5JXX7 168 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 OVOS1Q6IE37 1185 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 SLC8B1Q6J4K2 584 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 EPM2AIP1Q7L775 607 aaPredicted RBP11.78□□□□□ -0.52
NDEL1-208ENST00000580237 METTL23Q86XA0 190 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 ZSWIM2Q8NEG5 633 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 GOLGA5Q8TBA6 731 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 FEZF2Q8TBJ5 459 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 SCFD1Q8WVM8 642 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 ANKRD36BP1Q96IX9 119 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 PRKD2Q9BZL6 878 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 KIAA1586Q9HCI6 787 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 AGPAT3Q9NRZ7 376 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
NDEL1-208ENST00000580237 TIMM13Q9Y5L4 95 aaPredicted RBP11.78□□□□□ -0.52
NDEL1-208ENST00000580237 SPTBN5Q9NRC6 3674 aaKnown RBP11.78□□□□□ -0.52
NDEL1-208ENST00000580237 WDR27A2RRH5 827 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 M0QZQ0 153 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 CLIC2O15247 247 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 TNNC2P02585 160 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 RPN1P04843 607 aaKnown RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 ITGB3P05106 788 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 PAX3P23760 479 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 HOXA9P31269 272 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 PNPLA4P41247 253 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 AARSP49588 968 aaKnown RBP eCLIP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 LILRA4P59901 499 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 SNRPFP62306 86 aaKnown RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 EHHADHQ08426 723 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 BFSP1Q12934 665 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 SNRNP35Q16560 246 aaKnown RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 PTPN21Q16825 1174 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 KNOP1Q1ED39 458 aaKnown RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 RSPO2Q6UXX9 243 aaPredicted RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 KRBA2Q6ZNG9 492 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 CBWD2Q8IUF1 395 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 ZNF507Q8TCN5 953 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 ZNF707Q96C28 371 aaPredicted RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 SENP8Q96LD8 212 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 FNBP1Q96RU3 617 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 OXCT2Q9BYC2 517 aaPredicted RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 MTMR12Q9C0I1 747 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 GOLPH3LQ9H4A5 285 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 CYP4F11Q9HBI6 524 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 PDE11AQ9HCR9 933 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 WDR6Q9NNW5 1121 aaKnown RBP11.77□□□□□ -0.53
NDEL1-208ENST00000580237 ITGA11Q9UKX5 1188 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 DSEQ9UL01 958 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 TECTAO75443 2155 aa11.77□□□□□ -0.53
NDEL1-208ENST00000580237 FAM237AA0A1B0GTK4 181 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 ANO9A1A5B4 782 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 OR6C75A6NL08 312 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 PIRO00625 290 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 KLRC4O43908 158 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 EXOC3O60645 756 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 ZNF202O95125 648 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 KIF20AO95235 890 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 DLATP10515 647 aaKnown RBP11.76□□□□□ -0.53
NDEL1-208ENST00000580237 TYMPP19971 482 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 FSHRP23945 695 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 WNT7BP56706 349 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 PSMD2Q13200 908 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 MTMR3Q13615 1198 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 BMT2Q1RMZ1 405 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 TPGS2Q68CL5 300 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 LMBRD2Q68DH5 695 aaPredicted RBP11.76□□□□□ -0.53
NDEL1-208ENST00000580237 GRASPQ7Z6J2 395 aaPredicted RBP11.76□□□□□ -0.53
NDEL1-208ENST00000580237 ELMOD1Q8N336 334 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 XXYLT1Q8NBI6 393 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 RDH13Q8NBN7 331 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 KIAA0895Q8NCT3 520 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 ZNF461Q8TAF7 563 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 RHOBTB2Q9BYZ6 727 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 CGNQ9P2M7 1197 aaKnown RBP11.76□□□□□ -0.53
NDEL1-208ENST00000580237 AGAP1Q9UPQ3 857 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 INSL5Q9Y5Q6 135 aa11.76□□□□□ -0.53
NDEL1-208ENST00000580237 KPNA7A9QM74 516 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 CYB561D2O14569 222 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 SPTLC1O15269 473 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 ASGR2P07307 311 aa11.75□□□□□ -0.53
NDEL1-208ENST00000580237 OR4Q2P0C623 313 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms