RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 FNIP2Q9P278 1114 aa17.66■□□□□ 0.42
RARA-209ENST00000579727 CGNQ9P2M7 1197 aaKnown RBP17.66■□□□□ 0.42
RARA-209ENST00000579727 MAN1B1Q9UKM7 699 aa17.66■□□□□ 0.42
RARA-209ENST00000579727 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
RARA-209ENST00000579727 CDY1Q9Y6F8 540 aa17.66■□□□□ 0.42
RARA-209ENST00000579727 MTCL1Q9Y4B5 1905 aaKnown RBP17.65■□□□□ 0.42
RARA-209ENST00000579727 BIN1O00499 593 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 KRT19P08727 400 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 OR1D2P34982 312 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 PRCPP42785 496 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 MRE11P49959 708 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 ARPP19P56211 112 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 LILRA4P59901 499 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 CREMQ03060 361 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 SMAD4Q13485 552 aaKnown RBP17.65■□□□□ 0.42
RARA-209ENST00000579727 CAMK4Q16566 473 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 ZNF658Q5TYW1 1059 aaPredicted RBP17.65■□□□□ 0.42
RARA-209ENST00000579727 CEP135Q66GS9 1140 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 NT5DC4Q86YG4 428 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 SMRP1Q8NCR6 262 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 SPATA20Q8TB22 786 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 PLEKHO2Q8TD55 490 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 ANKRD36BP1Q96IX9 119 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 MTRRQ9UBK8 725 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 AGAP1Q9UPQ3 857 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 USP15Q9Y4E8 981 aaPredicted RBP17.65■□□□□ 0.42
RARA-209ENST00000579727 C2orf16Q68DN1 1984 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 ZNF318Q5VUA4 2279 aa17.65■□□□□ 0.42
RARA-209ENST00000579727 M0QZQ0 153 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 TNNC2P02585 160 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 TAF6P49848 677 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 PSMD6Q15008 389 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 TMC5Q6UXY8 1006 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 ANKS3Q6ZW76 656 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 CSGALNACT2Q8N6G5 542 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 CACTINQ8WUQ7 758 aaKnown RBP17.64■□□□□ 0.41
RARA-209ENST00000579727 SENP8Q96LD8 212 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 FNBP1Q96RU3 617 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 CGRRF1Q99675 332 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 GZF1Q9H116 711 aaPredicted RBP17.64■□□□□ 0.41
RARA-209ENST00000579727 S1PR5Q9H228 398 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 INTS13Q9NVM9 706 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 DZANK1Q9NVP4 752 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 DMAC2Q9NW81 257 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 TRAF3IP3Q9Y228 551 aa17.64■□□□□ 0.41
RARA-209ENST00000579727 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.64■□□□□ 0.41
RARA-209ENST00000579727 SYN3O14994 580 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 TNNI1P19237 187 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 NR2F2P24468 414 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 AARSP49588 968 aaKnown RBP eCLIP17.63■□□□□ 0.41
RARA-209ENST00000579727 BFSP1Q12934 665 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 SURF1Q15526 300 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 CTXN3Q4LDR2 81 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 PDXDC1Q6P996 788 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 CLEC17AQ6ZS10 378 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 WDR49Q8IV35 697 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 SLC9A9Q8IVB4 645 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 GPR65Q8IYL9 337 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 EEF2KMTQ96G04 330 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 SIX4Q9UIU6 781 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 FBXL5Q9UKA1 691 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 ITGA11Q9UKX5 1188 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 WDFY4Q6ZS81 3184 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 C5orf42Q9H799 3197 aa17.63■□□□□ 0.41
RARA-209ENST00000579727 TRIM49BA6NDI0 452 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 RFPL2O75678 378 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 ODC1P11926 461 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 CD44P16070 742 aaKnown RBP17.62■□□□□ 0.41
RARA-209ENST00000579727 SP100P23497 879 aaPredicted RBP17.62■□□□□ 0.41
RARA-209ENST00000579727 DLG4P78352 724 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 YWHAHQ04917 246 aaPredicted RBP17.62■□□□□ 0.41
RARA-209ENST00000579727 DUOXA2Q1HG44 320 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 PUS10Q3MIT2 529 aaKnown RBP17.62■□□□□ 0.41
RARA-209ENST00000579727 SV2CQ496J9 727 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 ZCWPW2Q504Y3 356 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 ZNF280DQ6N043 979 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 ELOA2Q8IYF1 753 aaPredicted RBP17.62■□□□□ 0.41
RARA-209ENST00000579727 KREMEN2Q8NCW0 462 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 APPL2Q8NEU8 664 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 CXorf38Q8TB03 319 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 MFSD14AQ96MC6 490 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 ZNF560Q96MR9 790 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 SFXN1Q9H9B4 322 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 LMBRD1Q9NUN5 540 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 BACE2Q9Y5Z0 518 aa17.62■□□□□ 0.41
RARA-209ENST00000579727 LRRIQ3A6PVS8 624 aaPredicted RBP17.61■□□□□ 0.41
RARA-209ENST00000579727 PRR33A8MZF0 331 aa17.61■□□□□ 0.41
RARA-209ENST00000579727 KPNA7A9QM74 516 aa17.61■□□□□ 0.41
RARA-209ENST00000579727 H7C4K7 107 aa17.61■□□□□ 0.41
RARA-209ENST00000579727 CYB561D2O14569 222 aa17.61■□□□□ 0.41
RARA-209ENST00000579727 OR4Q2P0C623 313 aa17.61■□□□□ 0.41
RARA-209ENST00000579727 HOXB8P17481 243 aaPredicted RBP17.61■□□□□ 0.41
RARA-209ENST00000579727 BMP6P22004 513 aa17.61■□□□□ 0.41
RARA-209ENST00000579727 CDR1P51861 262 aa17.61■□□□□ 0.41
RARA-209ENST00000579727 PMS1P54277 932 aaKnown RBP17.61■□□□□ 0.41
RARA-209ENST00000579727 ROR1Q01973 937 aa17.61■□□□□ 0.41
RARA-209ENST00000579727 MRPL58Q14197 206 aaKnown RBP17.61■□□□□ 0.41
RARA-209ENST00000579727 SMAD2Q15796 467 aaKnown RBP17.61■□□□□ 0.41
RARA-209ENST00000579727 LILRA6Q6PI73 481 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms